Rhodoferax sp. AJA081-3: HZ993_00025
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Entry
HZ993_00025 CDS
T08330
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZ993_00025 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoa03019
]
HZ993_00025 (pnp)
03016 Transfer RNA biogenesis [BR:
rhoa03016
]
HZ993_00025 (pnp)
Enzymes [BR:
rhoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HZ993_00025 (pnp)
Messenger RNA biogenesis [BR:
rhoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HZ993_00025 (pnp)
Transfer RNA biogenesis [BR:
rhoa03016
]
Prokaryotic type
tRNA degradation factors
HZ993_00025 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
DNA_pol3_a_NI
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QTN28291
UniProt:
A0A975EA04
LinkDB
All DBs
Position
3593..5710
Genome browser
AA seq
705 aa
AA seq
DB search
MSIFNKVTKTFQWGQHTVTMETGEIARQSTGAVLLDMDGTVVLATVVAKTEGKPGQDFFP
LTVDYLEKSYAAGKIPGSFFKREGRPSEFETLTSRLIDRPIRPLFPEGFFNEVHVVIHTV
SLNPEVDADIAAMIAVSAALSISGVPFNGPIGAARVGYVNGEYVLNPGQTQRKDSIMDLV
VAGTEAAVLMVESEAQQLSEEIMLGGVVYGHEQSAIAINAIHELVRDAGKPVWDWKAPAK
DEALIAKIDGLAKAKLEAAYQIRNKQARTQACRAAYSEVMAALKADGASFDAVAIEGLLF
EIEAKIVRGQILAGEPRIDGRDTRTVRAIEIRNSVLPRTHGSALFTRGETQALVVTTLGT
ERDAQRIDALSGEYEDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALAAVLPSK
EDFPYTMRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKEDNRFAVL
TDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMAEAKTEVSNFAPRLFTMKINPEKIRDVIGKGGSVIRALTEETGTQINIDEDGTITIA
SADPAKAEEAKRRIEQITAEVEIGKVYEGPITKLLDFGALVNLLPGKDGLLHISQIAHER
VEKVSDYLTEGQIIKVKVMETDEKGRIKLSMKALLDRPVQTADQG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcaacaaagtcaccaagaccttccaatggggtcaacacaccgtcacgatg
gaaaccggcgaaatcgcgcggcaatccaccggcgccgtattgttggacatggacggcacc
gtcgttttggccaccgtggttgccaagaccgaaggcaagcccggccaggattttttcccc
ctgaccgttgattacctggaaaagagctacgccgcaggcaagatccccggcagcttcttt
aaacgtgaaggccgccccagcgaatttgaaacgctgaccagccgcctgattgatcgcccc
attcgccccctgttccccgaaggtttcttcaacgaagtgcacgtggtgatccacacagtg
tcgttgaaccctgaagtggacgctgacatcgctgcgatgatcgcagtgagcgcagctctg
tccatctctggcgtgccgttcaacggccccatcggcgcagcccgcgtcggttacgtcaat
ggcgaatacgtgttgaaccctggccagacccagcgcaaagactccatcatggatctggtc
gttgccggtaccgaagccgctgtgctgatggtcgagtccgaagcacaacagctgtccgaa
gaaatcatgctcggtggtgtggtttacggccacgaacaaagcgcgatcgccatcaacgcg
atccacgaactggtgcgtgacgctggcaagccggtctgggactggaaagctcctgccaag
gacgaagccctgatcgccaagatcgacggtctggccaaagccaagctggaagctgcttac
caaatccgcaacaagcaagcccgtacgcaagcttgccgcgctgcctactccgaagtcatg
gctgccctgaaggccgacggcgcttctttcgacgcagtggccatcgaaggtctgctgttt
gaaatcgaagccaagatcgttcgcggccagattctggcgggcgagccccgtatcgacggc
cgcgacacacgcactgtgcgcgctatcgaaatccgcaacagcgtgctgccccgtacccac
ggttccgccctgttcacccgtggtgaaacacaggcgctggtggtgaccaccctgggcacc
gaacgtgatgcacagcgtatcgacgcactctccggcgaatacgaagaccgcttcatgctg
cactacaacatgcctccgttcgccactggcgaaaccggccgtgtcggtacccctaagcgc
cgcgaaatcggccacggccgtctggccaagcgcgcgctggcagccgtgttgccctccaag
gaagacttcccgtacaccatgcgtgtggtttccgaaatcaccgaatccaacggctcttcg
tcgatggcttccgtttgcggcggctgcctgtcgctgatggacgctggtgtgcctatgaaa
gcccacgtggctggtatcgccatgggtctgatcaaggaagacaaccgcttcgcggtgttg
accgacattctgggtgacgaagatcacctgggtgatatggacttcaaggtcgccggcacc
accaacggtattaccgcgctgcagatggacatcaaaatccagggcatcaccaaggaaatc
atgcaagtcgctttggcccaagccaaggaagcgcgcatgcacattctgggcaagatgcaa
gaagcgatggctgaagccaagaccgaagtgtccaacttcgcaccgcgtctgttcaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggttccgtgatccgtgcg
ctgaccgaagaaaccggcacgcaaatcaacatcgacgaagacggcaccatcaccatcgca
tcggctgatcccgccaaggcagaagaagccaaacgccgcatcgagcagatcacggctgaa
gtcgaaatcggcaaggtctacgaaggccccatcaccaagctgctggacttcggtgccctg
gtgaatctgctgcccggcaaagacggcctgttgcacatcagccagatcgcacacgagcgt
gtggagaaggtgtccgactacctgaccgaaggccagatcatcaaggtcaaggtcatggaa
accgacgagaagggccgcatcaagctgtccatgaaggccctgttggaccgtccagtccaa
actgcagaccaaggctaa
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