Rhodoferax sp. AJA081-3: HZ993_02400
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Entry
HZ993_02400 CDS
T08330
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoa03016
]
HZ993_02400 (truB)
Enzymes [BR:
rhoa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HZ993_02400 (truB)
Transfer RNA biogenesis [BR:
rhoa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HZ993_02400 (truB)
Prokaryotic type
HZ993_02400 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QTN28724
UniProt:
A0A975EAV4
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All DBs
Position
complement(517929..518903)
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AA seq
324 aa
AA seq
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MVQAPRARVTRRPVHGVLLLDKPLGWSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLPL
CFGAATKFSQMQLDADKEYEATALLGIKTSTGDAEGEVIEVRPVHVDAAAVARVVPRFTG
PILQTPPMHSALKKDGKALYEYARAGIEVEREARAVTIHMLNVALAPVDAGQIAINMVVK
CSKGTYIRTLGEDLGEALGCGAHLTRLRRTATGSFTAAQCVTLEALEAMTEEERMACLLP
VDALLERHTPVTLDSENTVRFLSGVRRRGNWADEKQVAVYSIEPHALLGTAHTEAGELIP
GRLLSPLEIAQSQTQQADSSKEAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggttcaagcgccacgtgcacgggtcactaggcgccccgtgcatggggtgctgttgctg
gacaagccattgggctggtcgagcaacgacgccttgcaaaaggtcaaatggctgttacgc
gccgagaaggctggccacaccggcacgctggacccgttggccacgggcgtgctgccgctg
tgttttggtgccgccaccaagttcagccaaatgcaactggatgcagacaaggaatatgaa
gctacggcgctgctggggatcaaaaccagcaccggtgatgcggaaggtgaagtgattgaa
gtgcggccggtccatgtggacgcagccgcggtggcgcgggttgtaccccggttcaccggg
cccatactgcagacgccgcccatgcacagtgccttgaagaaggatggcaaagctctgtac
gaatatgcgcgtgccgggatagaagtagagcgggaagcacgcgcagtcacaattcatatg
ctgaatgtggctctagcccccgtagatgctggtcagattgctatcaatatggtagtaaaa
tgcagcaagggcacgtatatccgtaccctgggtgaagacctcggagaggccctgggttgt
ggtgcccacctgacccgcctgcgcagaaccgcgacgggctcgttcacggcggcacagtgc
gtgaccttggaagcgctggaggccatgacagaagaagaacggatggcctgtctattaccg
gtggacgcgctgttggagcgccacacaccggtcacgttggacagcgaaaatacggtccgg
ttcttgagcggcgtgcgccgtcgcggaaactgggccgacgagaaacaggttgcggtgtac
agcatcgaaccgcacgctttgttgggcacggcccatacggaagcgggggagttgataccg
gggcgcttgctgagcccgcttgagattgcacagtctcaaacccagcaagcagacagcagt
aaggaagctgcctga
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