Rhodoferax sp. AJA081-3: HZ993_05460
Help
Entry
HZ993_05460 CDS
T08330
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa00260
Glycine, serine and threonine metabolism
rhoa00460
Cyanoamino acid metabolism
rhoa00630
Glyoxylate and dicarboxylate metabolism
rhoa00670
One carbon pool by folate
rhoa00680
Methane metabolism
rhoa01100
Metabolic pathways
rhoa01110
Biosynthesis of secondary metabolites
rhoa01120
Microbial metabolism in diverse environments
rhoa01200
Carbon metabolism
rhoa01230
Biosynthesis of amino acids
rhoa01240
Biosynthesis of cofactors
rhoa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HZ993_05460
09102 Energy metabolism
00680 Methane metabolism
HZ993_05460
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HZ993_05460
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HZ993_05460
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HZ993_05460
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HZ993_05460
Enzymes [BR:
rhoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HZ993_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QTN29279
LinkDB
All DBs
Position
1170426..1171673
Genome browser
AA seq
415 aa
AA seq
DB search
MYHRNILVEQADPEVWAAIVAENARQEDHIELIASENYCSPAVMAAQGSQLTNKYAEGYP
GKRYYGGCENVDVVEQLAIDRLKQLFGANFANVQPNSGSQANQGAFFALLQPGDTIMGMS
LAEGGHLTHGMPLNMSGKWFNVISYGLDAQEDIDYAAMEALAREKKPKLIIAGASAFALR
IDFERFGKIAKEIGAYFMVDMAHYAGLVAAGVYPNPLPYADVVTSTTHKSLRGPRGGIIL
TNDEAIAKKINSAIFPGIQGGPLMHVIAGKAVAFKEALTPEFKAYQTQVVKNAKVLADTL
TERGLRIVSGRTESHVMLVDLRPKNMTGKEAEAVLGLAHMTCNKNGIPNDPQKPMVTSGI
RLGTPAMTTRGFKEDEVRATAHLIADVLDNPHDAANIDAVRAKVHALTARFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaccgcaatatcctcgtcgaacaagctgaccccgaagtgtgggccgccatcgtg
gccgagaacgcccgccaggaagaccacatcgagctgatcgcctctgaaaactactgctcc
cccgccgtcatggccgcgcaaggcagccagctgaccaacaagtacgccgaaggctacccc
ggcaagcgctactacggcggctgcgagaacgtggacgtggtcgaacaactcgccatcgac
cgcctcaagcaattgtttggcgccaacttcgccaatgtgcagcccaactcgggttcgcag
gccaaccagggcgcgttcttcgccctgctgcagcccggtgacaccatcatgggcatgagc
ctggccgaaggtggccacctgacccacggtatgccgctgaacatgagcggcaagtggttc
aatgtcatttcctacggcctggacgcccaggaagacatcgactacgccgccatggaagcg
ctggcccgcgagaagaagcccaagctcatcatcgctggcgcctcggcctttgcgctgcgt
atcgattttgaacgctttggcaagattgccaaggaaatcggcgcttacttcatggtcgat
atggcccactacgccggcctggtggccgcgggcgtctaccccaaccccctgccctacgcc
gacgtggtcacatccaccacacacaagagcctgcgcggcccgcgcggtggcatcatcctg
acgaatgacgaggcgattgccaagaagatcaactcggccatcttccctggtattcagggc
ggcccactgatgcacgtcatcgccggcaaggctgtggccttcaaagaggcgctgacaccc
gagttcaaggcttaccagacgcaagtggtcaaaaatgccaaggttttggctgacacactg
accgagcgcggcctgcgcatcgtttccggccgcaccgagagccacgtcatgctggtggac
ctgcgccccaagaacatgaccggcaaggaagccgaggcggttttgggcttggcccacatg
acctgcaacaagaacggcattccgaacgacccgcaaaaacccatggtcaccagcggcatc
cgcctgggaaccccagccatgaccacccgcggcttcaaggaagacgaggtgcgcgccacc
gcccacctgatcgccgacgtgctggacaacccgcacgatgcagccaacatcgacgccgtg
cgggctaaggtgcatgccttgaccgcgcgcttcccggtctacggttaa
DBGET
integrated database retrieval system