Rhodoferax sp. AJA081-3: HZ993_05570
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Entry
HZ993_05570 CDS
T08330
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhoa
Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoa03032
]
HZ993_05570
03036 Chromosome and associated proteins [BR:
rhoa03036
]
HZ993_05570
03400 DNA repair and recombination proteins [BR:
rhoa03400
]
HZ993_05570
DNA replication proteins [BR:
rhoa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HZ993_05570
Chromosome and associated proteins [BR:
rhoa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HZ993_05570
DNA repair and recombination proteins [BR:
rhoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HZ993_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
UBA_HYPK
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QTN29298
UniProt:
A0A975ECB8
LinkDB
All DBs
Position
complement(1191719..1191991)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIEHIAKHADISKAAATRALESTIGAVKTTLKKGGTVSLVGFGTFAVGKRAARTG
RNPRTGAAIKIKAAKVPKFRPGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaccgaactgattgagcacattgcaaagcatgctgatatttccaaggccgca
gctacgcgtgctctggagtccactattggtgcggtcaaaaccaccttgaaaaaaggcggc
acggtatcactggtaggttttggtacatttgcggttggtaaacgtgctgcgcgcaccggt
cgcaatccccgtaccggcgctgcgattaaaatcaaggctgccaaggttccaaagttccgt
ccgggcaaagcattgaaagatgccctgaattga
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