Rhodoferax sp. AJA081-3: HZ993_05965
Help
Entry
HZ993_05965 CDS
T08330
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa00061
Fatty acid biosynthesis
rhoa00071
Fatty acid degradation
rhoa01100
Metabolic pathways
rhoa01212
Fatty acid metabolism
rhoa02024
Quorum sensing
rhoa04146
Peroxisome
Module
rhoa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HZ993_05965
00071 Fatty acid degradation
HZ993_05965
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HZ993_05965
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZ993_05965
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhoa01004
]
HZ993_05965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoa04147
]
HZ993_05965
Enzymes [BR:
rhoa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HZ993_05965
Lipid biosynthesis proteins [BR:
rhoa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HZ993_05965
Exosome [BR:
rhoa04147
]
Exosomal proteins
Exosomal proteins of breast milk
HZ993_05965
Exosomal proteins of breast cancer cells
HZ993_05965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QTN29370
LinkDB
All DBs
Position
complement(1279283..1280962)
Genome browser
AA seq
559 aa
AA seq
DB search
MAKPKLILDYVFDHEAKLADRVYLTQPIGNDQVIDYTWKQTLDQSRRMAAHIKAQGLEPG
ARVAILSKNCAHFFMAELAIWMAGCTTVAIFPTETAETISYVLEHSGASMLFVGKLDTWD
AQKPGVPASLPCISFPLAPKNSYEGWDAIVARTKPMTGRVTREGKDIAILLYTSGSTGTP
KGVMHSFERITKVSENISKDIKSRIGDIEDNRILSYLPLAHVFERAWVECASMVDGKTHV
FFAESLDTFVKDLNRARPTTFISVPRLWLKFQQGVFAKMPPKKLNRLLSIPILSGIVKRK
VLKNLGLDQALLAGSGSAPIPAELITWYQRLGLNLVEGYAMSEDFAYSHNSTPEVNAPGC
VGLPLPGVEVKISEEGEILIKSPGQLVGYYKRPDLDAEVFTSDGYFRTGDRGERRADGLL
KITGRVKELFKTSKGEYVAPAPIENRLNAHPLVEMSMVSGPGQPAAYAMVVLAENERPKQ
KDPAFRKHVEAELSQLLKDVNADLVGHEKLQFIVIAQQPWTIENGFLTPTMKIRRARIEG
EVAPKVDNWYGGKDKVQWS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaacccaaactgattctggactacgtttttgatcacgaggccaagctggcagac
cgggtttatttgacccagcccatcggcaacgaccaggtcattgactacacctggaaacaa
accctggatcagtcccgccgcatggcagcacatatcaaggcgcaaggcctggagcctggt
gcacgtgtagccattctgtccaagaactgcgcacatttcttcatggccgagttggccatc
tggatggcgggctgcaccaccgtcgccatcttccccaccgagaccgcagagactatcagt
tacgttctggagcacagcggcgccagcatgttgtttgtcggcaagctcgacacctgggac
gcgcagaaacctggtgtgcccgcatctctgccttgcatctctttcccgttggcacccaag
aacagctacgaaggctgggatgcgatcgtggcgcgcaccaaacccatgaccgggcgcgtt
acacgcgaaggcaaggacattgcgatcctgctgtacacatccggctccaccggcacaccc
aaaggcgtgatgcacagttttgagcgcatcaccaaggtcagtgaaaacatcagcaaggac
atcaagtcgcgcatcggtgacatcgaagacaaccgcatcctgtcctacctgccgttggcc
cacgtgttcgagcgggcctgggtggagtgtgcatccatggtggacggcaaaacccatgtg
ttctttgccgaatcgctggacacctttgtcaaggatctgaaccgcgcacggcccaccacc
tttatctcggtgccgcgcctgtggctcaagttccagcagggcgtattcgccaagatgccg
cccaaaaagctcaaccgtctgctcagcattcctatcctgagcggcatcgtcaaacgcaag
gtgctgaagaacctgggcctggaccaggccttgctggccggcagcggatcggcccctatt
cctgccgagctgatcacctggtaccaacgcctgggcctgaacctggtggaggggtatgcg
atgtcggaagactttgcctattcgcacaactccacacccgaggtcaacgcacccggttgt
gtgggcctgcccctgccgggcgtagaggtcaagatcagtgaagagggcgagatcctgatc
aagtcccccggccaattggtgggctactacaagcgccctgatctggatgccgaagtgttc
acgtcggatggttacttccgcaccggtgaccgtggcgagcgccgtgccgatggcctgctc
aagatcaccggccgggtcaaggagctgttcaagacatccaagggcgaatacgtggccccc
gcgcccatcgagaaccgtctgaacgcccacccgctggtggaaatgagcatggtctccggc
cctggccaacccgctgcgtatgcgatggtggtgctggccgaaaacgagcggcccaagcag
aaagaccctgccttccgcaaacatgtggaagccgaattgagccaactgctgaaggatgtg
aacgccgatctggtcggccacgaaaagctgcaattcatcgtgattgcccagcagccctgg
accatcgaaaacggcttcctgacccccaccatgaaaatccgccgtgcccgcatcgagggc
gaggtggcccccaaggtggacaactggtacggtggcaaagacaaggtgcagtggagctga
DBGET
integrated database retrieval system
