KEGG   Rhodoferax sp. AJA081-3: HZ993_07025
Entry
HZ993_07025       CDS       T08330                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rhoa  Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:rhoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhoa03032]
    HZ993_07025
   03036 Chromosome and associated proteins [BR:rhoa03036]
    HZ993_07025
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhoa02048]
    HZ993_07025
Enzymes [BR:rhoa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HZ993_07025
DNA replication proteins [BR:rhoa03032]
 Prokaryotic type
  DNA Topoisomerases
   HZ993_07025
Chromosome and associated proteins [BR:rhoa03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HZ993_07025
Prokaryotic defense system [BR:rhoa02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    HZ993_07025
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: QTN29564
LinkDB
Position
complement(1518337..1520307)
AA seq 656 aa
MSVKATPEYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHVIQEVLDNAADEALGGYGKKIK
VTVHVDGSIAVEDDGRGIPFGMHPEEKAPVIELVFTRLHAGGKFDKGKGGAYSFSGGLHG
VGVSVTNALAKRLEATSYREGQVATIVFENGDVTQALEARKTGEGDRKSGTTVRVWPDAK
YFESAALPMAELTHLLRSKAVLMPGVSVSLLIEKTKETQTWLYKGGLRDYLTQTLTGDPV
IPLFEGEGFADNQSDNFAEGEGASWCVAFTEDGQPVRESYVNLIPTSAGGTHESGLRDGL
FTAVKSFIDLHSLLPKGVKLMPEDVFARASYVLSTKVLDPQFQGQIKERLNSRDAVRLVS
SFVRPALELWLNQHVDYGKKLAELAIKAAQSRQKAGQKVEKRKSSGVAVLPGKLTDCESK
DIAYNEVFLVEGDSAGGSAKMGRDKENQAILPLRGKVLNTWEVDRDRLFGNTEIHDISVA
IGVDPHGPNDSPDMSGLRYGKVCILSDADVDGSHIQVLLLTLFFRHFPKLIETGHVFVAR
PPLFRVDAPARGKKPASKAYALDEGELVAILDKLRKEGVREGAWSISRFKGLGEMNAEQL
WDTTLNPDTRRLLPVTLGAINFGDTEALITKLMGKGEAAARRELMELHGDSVEVDV
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgtccgtcaaagctacccccgaatactccgaaggttccatccgggtcctcaaaggcctg
gagcccgtcaaacaacgtccgggcatgtacacccgcaccgacaacccgctgcacgtcatc
caggaagtgctggacaacgcggccgatgaggccctgggcggttacggtaaaaagatcaaa
gtcaccgtccatgtggatggctccatcgccgtagaagacgatggccgcggcatcccgttt
ggcatgcaccccgaagaaaaggcgccggtcatcgagctggtgttcacccgcctgcacgcc
ggtggcaagttcgacaagggcaagggcggcgcctacagcttctccggtggtctgcacggc
gtgggtgtcagcgtgaccaatgccctggccaagcgcctggaggctacttcatatcgcgag
ggccaggtggccaccatcgtctttgaaaacggtgacgtcacccaggcgctggaagcgcgc
aaaacgggcgagggtgaccgtaaatccggcaccacggtacgtgtctggcccgatgccaaa
tactttgagtccgccgcgctgccgatggccgagctgacccacctgctgcgcagcaaagcg
gtgttgatgcccggtgtcagcgtgtcgctgctgatcgagaaaaccaaagaaacccaaact
tggctctacaaaggcggcctgcgcgactacctgacacaaacgcttactggcgaccccgtc
atccctttgtttgaaggcgaaggttttgcagacaaccaaagtgacaactttgccgaaggc
gagggcgcttcctggtgtgtcgcctttaccgaagacggccaacccgtgcgcgaaagttac
gtcaacctgatccccaccagcgccggtggtacccacgaaagcggcctgcgcgatggcctg
ttcaccgctgtcaaaagcttcatcgacctgcattcgctgttgcccaaaggtgtcaagctg
atgcccgaagacgtgtttgcccgcgctagttatgtgttgtccaccaaggtgctggacccg
cagttccagggccagatcaaagaacgactcaattcccgtgacgccgtgcgtctggtctcc
agttttgtgcgccccgcgctggaactgtggctcaatcagcacgtggactacggcaagaaa
ttggcggagttggcgatcaaagccgcgcaaagccgacaaaaagccggccaaaaggtggag
aagcgcaaaagctctggtgtggccgtgttacccggcaaactaaccgactgcgaaagcaag
gacattgcctacaacgaagtgttcctggtcgagggtgattctgcgggcggcagcgccaag
atgggccgcgacaaggaaaaccaggcgattttgcccctgcgcggcaaggtcttaaatacc
tgggaagtggaccgcgaccgcctgtttggcaacaccgaaatccacgacatctcggtcgcc
atcggggtcgacccccacggccccaacgactcgccggatatgtccggcctgcgctacggc
aaggtttgcatactgagtgatgcggacgtggacggctcccacatccaggtgctgctgttg
accctgttcttccgccacttccctaaactgatcgaaaccggccacgtgtttgtggcccgt
ccacccttgttccgggtggatgcccccgcgcgcggtaaaaaacccgcttccaaggcgtac
gcgctggatgagggtgaattagtcgccattctcgacaaattgcgcaaagaaggcgtgcgc
gagggcgcgtggagcatcagccgcttcaagggtctgggtgaaatgaatgccgagcagttg
tgggacaccaccctgaaccccgacacccgccgcctcctgccggtcacactgggcgccatc
aattttggcgataccgaggcgctgatcaccaaactcatgggcaaaggcgaggccgccgcc
cggcgcgaactgatggagttgcacggcgactcggtcgaggtggacgtgtga

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