Rhodoferax sp. AJA081-3: HZ993_07630
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Entry
HZ993_07630 CDS
T08330
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rhoa
Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoa03032
]
HZ993_07630
03036 Chromosome and associated proteins [BR:
rhoa03036
]
HZ993_07630
03400 DNA repair and recombination proteins [BR:
rhoa03400
]
HZ993_07630
DNA replication proteins [BR:
rhoa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HZ993_07630
Chromosome and associated proteins [BR:
rhoa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HZ993_07630
DNA repair and recombination proteins [BR:
rhoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HZ993_07630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QTN29671
UniProt:
A0A975ECK9
LinkDB
All DBs
Position
1645827..1646138
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AA seq
103 aa
AA seq
DB search
MTRSDLVEELANRFGQLTHRDAEFAVKAILDAMNDALVAGHRIEIRGFGSFSINHRPPRM
GRNPRSGESVAIPEKRVPHFKPGKALRESVDQRTAELEGKVKA
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgacacgctccgaccttgttgaagaactcgccaaccgttttggccagctcacccatcgc
gatgccgaatttgccgtcaaggccattctggacgccatgaacgacgccctggtcgcaggc
caccgcatagaaattcgcggtttcggcagtttctcgatcaaccaccgcccgccccgcatg
ggtcgcaacccccgcagcggcgaaagtgtggccatccccgagaagcgtgtaccccatttc
aagcctggcaaagccctgcgcgaatccgtggaccagcgcaccgctgaactcgaaggcaaa
gtcaaagcctga
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