Rhodoferax sp. AJA081-3: HZ993_11310
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Entry
HZ993_11310 CDS
T08330
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhoa03009
]
HZ993_11310 (rsmB)
Enzymes [BR:
rhoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HZ993_11310 (rsmB)
Ribosome biogenesis [BR:
rhoa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HZ993_11310 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_25
NusB
FtsJ
Cas_CT1975
MTS
Cons_hypoth95
AtzG-like
Motif
Other DBs
NCBI-ProteinID:
QTN30329
LinkDB
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Position
complement(2426771..2428096)
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AA seq
441 aa
AA seq
DB search
MNPKDEQIPLWRQLSATATVIQAVREGVSGTAALETVPAELRPGVQSLAFHVWRNMGRAQ
ALRKLLAAKLPPPQADALLCVALALAWSDAQAPYDMFTLVNQTVEAAKRGAGTHAQANFL
NACLRRFLRERDALVAQTDADPVAVWNHPGWWIKRLQKEQSSRWREVLAAANCHAPMTLR
VNPRKATPNDYLAALQSAGIAVRANSGATIVLDQPVGVQRLPGFEQGWVSVQDTAAQMAV
PLLLDGLPEQAHMRILDACAAPGGKTAHLLELSQAHVLALEIDAVRTRRITENLARLQLQ
AQVVTADASRPQDWWDGQPFDAILLDAPCTASGIVRRHPDVRWLRRETDIAQLAAIQKRM
LQALWGLLRPGGSLLYCTCSLFLAEGDGQVQTFLTHNTDAVLLPSPGHLMPQNVAKADAV
PDNGYRDHDGFYYALLQKQMA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaaggacgaacaaattcccctgtggcgccagctcagtgccacagccacagtc
atacaagcagtgcgggagggtgtttcgggtaccgcagccctggagaccgtgcctgccgaa
ctacggcccggcgttcagtcgctggcgttccacgtatggcgcaacatgggtcgggcacag
gcgctgcgcaaactgctggctgccaagctgccgcccccgcaagccgatgccctcctttgt
gtcgctttggcactggcgtggagtgatgcccaggcgccttacgacatgttcaccctggtc
aatcagaccgtagaggctgccaaacgtggcgcgggtacccacgcgcaagccaacttcctg
aacgcctgcctgcgccggttcctgcgcgaacgggatgccttggtcgcgcaaaccgatgcc
gatcccgtcgccgtttggaaccaccccggctggtggatcaagcgtttgcagaaggagcag
tcttcacgctggcgcgaggtgctggctgccgcaaattgccatgctcccatgacgctgcgg
gtcaacccccgaaaagccacgccaaacgactatttggccgcgttgcagagcgctggcatc
gccgtcagggccaacagtggcgcaaccatcgtgttggaccagcctgtcggcgtgcaacgc
ctgcccgggttcgaacagggatgggtctcggtgcaggacacggcggcgcaaatggcggtg
ccgttgttgttggatggtttgcccgaacaggcccatatgcgcatcctggacgcctgtgcg
gcgcctggaggcaaaaccgcgcacttgctggagttgtcgcaggcccacgtgttggcgctc
gaaattgacgccgtacgaacccgccggatcaccgaaaacctggcgcgtttgcagttgcaa
gcccaggtggtaacggccgacgcctcgcgcccgcaggactggtgggacgggcagccattc
gatgcgattttgctcgatgcgccctgtacagcctccggcattgtccgccgacacccggac
gtgcgctggttgcggcgtgaaaccgacattgcccaactggccgccattcagaaacgcatg
ctgcaggccttgtggggcttgttgcggcccggcgggagcttgttgtactgcacctgttcg
ctgtttttggcggaaggggacggacaggtccaaacgtttctcacacacaacaccgatgcg
gtgttgctgccgtcgccaggccatttaatgccccaaaatgtcgcaaaagcggatgccgtc
ccggacaatggttaccgtgaccacgatggcttttattacgcgttgctgcagaaacagatg
gcctga
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