Rhodoferax sp. AJA081-3: HZ993_11525 Help Entry HZ993_11525       CDS       T08330                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism rhoa  Rhodoferax sp. AJA081-3 Pathway rhoa02020   Two-component system rhoa02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:rhoa00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HZ993_11525 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HZ993_11525 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:rhoa03021]     HZ993_11525 (rpoN) Transcription machinery [BR:rhoa03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HZ993_11525 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR HTH_23 Motif Other DBs NCBI-ProteinID:  QTN30367 UniProt:  A0A975EF24 LinkDB All DBs Position complement(2471444..2473054) Genome browser AA seq 536 aa AA seqDB search MKQGLSLRVSQHLALTPQLQQSIRLLQLSTLELSQEVEQMLDENPFLELTQDEAVREDFG LAQADTPVSAGEREAEVAPASIADYADSTGASGTKDEETTPLGSGDDEPSWDGDGTTEMV PDDGEWGTDAKAKANNLGDGEDTDATELARTQESLQSFLHRQALSLRLSETDASALRFLI ESLNDDGYLEDPLPDLARSLAGDDEEQVEDLVHHFTVALGLLHSLEPAGVGARDLGECLR LQLRAQLDDALNPPEPEYASLLALALRICGQPMDLLARRDVKNLVQRCGGTDAQTREAIT LIARLEPKPGRRFIDVERNIVVPDVLVVAAGKARNGINPQFRVMLNPEVMPKLRVHDIYA NVLRNHRGGGKDSASYAGLQQRLQEARWFIKNIQQRFDTILRVSTAIVERQKGFFSHGEM AMRPLVLREIADELGLHESTISRVTTAKYMATPFGTFELKYFFGSGLGTESGGNASSTAV RALIKQFISAESDKKPLSDNQISEMLKEQGIECARRTVAKYREGLKIAPASLRKAL NT seq 1611 nt NT seq  +upstreamnt  +downstreamnt atgaagcagggcctttctctacgcgtttcgcagcacctggcgctcacgccccagttgcag cagtccatccgcctcttgcaactctccacgctggaactcagtcaggaggtggagcagatg ctggacgagaaccccttcctggagctgacccaggacgaggccgtgcgcgaggactttggc ctggcccaggccgacacaccggtcagcgccggtgagcgcgaagccgaggttgctcctgct tccatagcagactatgcagattccacgggggctagcggcacaaaagacgaagagacaacg ccgctgggcagcggtgacgatgagcccagctgggacggcgacggcaccaccgagatggtg cccgacgatggcgaatggggcacggacgccaaagccaaagccaacaacttaggcgacggc gaagataccgacgccaccgagttggcccgcacgcaggaatccttgcagtcctttttgcac cgccaggccctgagcctcaggctgagcgagaccgacgccagcgcgttgcgctttctgatc gagtcgctgaacgacgacggctacttggaagaccccttgcccgacctggcccgcagcctg gccggtgacgacgaagaacaggttgaagacctggtgcaccacttcacggtggccttgggt ctgctgcacagcctggagccagcaggcgtgggcgcgcgcgacctaggcgaatgcctgcgc ctgcagctgcgcgcccaactggacgacgcgctgaacccgcccgagcccgaatacgccagc ctgttggcactggctttgcgcatctgcggccagcccatggatttgctggcccgccgcgat gtcaaaaatctggtccaacgctgtggtggcaccgatgcacaaacgcgcgaagccatcaca ctgatcgcccggctggagcccaaacccgggcgccgcttcatcgacgtggagcgcaatatt gtggtgcccgacgtgttggtggtggccgcaggcaaggcccgcaatggcatcaacccgcag ttccgcgtcatgctcaaccccgaggtcatgcccaagctgcgggtgcacgacatttatgcc aacgtgctgcgcaaccaccgcggtggcggcaaagacagcgccagttacgccggcctgcag cagcgcctgcaagaggcccgctggttcatcaagaacatccagcagcgctttgacaccatc ctgcgcgtcagcacggccattgtggagcgacaaaagggcttcttctcccacggcgagatg gccatgcgcccactggtgctgcgtgagattgcggatgagctgggtttgcacgagtccacc atcagccgcgtcaccaccgccaaatacatggccacgccgtttggcacctttgagctgaag tacttctttggctctggcctgggcaccgagtctggcggcaacgcgtccagcaccgccgtg cgtgcgctgatcaagcaattcatcagcgccgagagcgacaagaagcccttgagcgataac cagatttccgaaatgctcaaagagcagggcattgaatgcgcccgccgcaccgtggccaaa taccgtgaggggctgaagattgctcccgcttcactgaggaaggccctatga

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