Rhodoferax sp. AJA081-3: HZ993_12965
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Entry
HZ993_12965 CDS
T08330
Name
(GenBank) DEAD/DEAH box helicase
Organism
rhoa
Rhodoferax sp. AJA081-3
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
QTN26256
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Position
2753858..2757331
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AA seq
1157 aa
AA seq
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MPSSLPINRVWFNPNSLEKLAANATWTRGRLLYSGQKVLELQIAPADGYWLLTGEVQGSE
RWPYTLTVELTLTSDGEIDTWDADCSCPVGYNCKHGVALTLKAAYQGLRLLGSEAAAQAV
RPASRTPPTAEELEAARLATQARLEDIQRKDAEAQLLTWFYEIDRASGNNDSGSSPGRVE
QYLFLLKPVGPSIRPQQLRLEAAVSSAKANGEWAKPKAIRTPPRAGQAAYDLASETDREV
LQLLLAMPDPDRSYYSAYSGSPGATPCGHVGLIALQQAASTGRLYSCHANGSPDHAWQWG
PPRTLDWGWHEVTPAHGGTPGWTLRARLHDAPATAKLFLNTPPLYLDSTNGLCGVVQVPG
MSEAQLAVLLKTPVLQASALKKHQVHLMQRLGKLPAPPMLENLVTVSGIPPTACLHLSPN
PPDLAHVRGLIQAQLRFEYQGYRGWWAGQGTTVVADGPQGRALLHRDAETELEAITRLMN
MGLVSAEGGIFGLPGDAPQHTWLQWADADYAPLRAAGFEVTLDDALKSWITHADALQVQL
QPQGQGPTSPWFDLSLGMEINGQRHNILPLLPDLIAAAASSPINTETGLPEIPPYVYLPN
QQAGHGGFIRLPTDTLKPWMAALLELVGDRAHDFTGDSLKLSRLDALRITAALGEGAVWD
GAAHLREMVQRLSGRAEMPEVAVPTGVHAELRPYQQQGLNWLQFLREHGLGGILADDMGL
GKTLQTLAHIQVEKDAGRLTHPALIIAPVSLMGNWRREAERFCPELRTLVLHGKERHDAA
HAISEHDIVIAPYSLLQRDKERWLEAQWHIVVLDEAQNIKNASTHAAQVVGQLQTHHRLC
LSGTPMENHLGEIWSLFHFLMPGFLGSQARFKELFRTPIEKLGDPERLQQLRARITPFML
RRTKALVAHELPPKVETIERVELSGKQADLYETIRLGMEKTVREALNTKGLAKSQITILD
ALMKLRQVCCDPRLLKLAAAQKVKTSAKLEQLMELLPEMVAEGRRILLFSQFTSMLTLIE
AELKQRGIPWVKLTGQSQNRDALIEQFTSGAVPLFLISLKAGGVGLNLPQADTVIHYDPW
WNPAVENQATDRAHRIGQTQTVFVYKLVAQGTIEERILALQERKAALADSMYSGSTGRKQ
PLFTEGDLAELLKPLSE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcagcttgccgataaaccgcgtctggttcaaccccaactctctggaaaaactc
gccgccaatgccacctggacgcgtggacgtttgctttacagcgggcaaaaggtgctcgaa
ctgcagattgcgcccgccgacggctactggctgctcacaggcgaggtgcaaggcagtgaa
cgctggccctacacgctcaccgtcgagctgaccctcacctccgatggtgagattgatacc
tgggatgccgactgcagctgccccgtgggctacaactgcaaacacggcgtggccctgacg
ctgaaggccgcctaccagggcctgcggttactgggcagcgaagcggcagcccaggccgta
cgcccagccagccgcacaccgcccacggcggaagagctggaagccgccagactggcaacc
caggcccgactagaggatatccaacggaaggacgccgaggcccagttgttgacctggttt
tacgaaatagaccgcgccagcggcaacaacgacagcgggagcagccccggccgcgtcgag
caatacctgtttctcctcaagcccgtagggcccagcatccggccccagcaattgcgcctg
gaagccgcggtgtccagcgccaaggccaacggcgaatgggccaaacccaaagccattcgc
acaccgccgcgcgcgggccaagcggcctatgacctggccagcgaaacggaccgcgaagtg
ctgcaactgttgctggccatgcccgaccctgaccgttcgtattacagcgcctacagcggc
agcccgggcgccacgccctgcggccatgttggcctgatcgccttgcaacaggccgccagc
accggtcgcctgtacagctgccatgccaacggcagccccgaccatgcgtggcagtggggg
ccaccccgcacactggactggggctggcacgaagtcacccccgcacacggcggcacaccc
ggctggaccctgcgcgccaggctgcacgacgcgcccgccacagccaagctgtttctgaac
acaccgccgctgtacctggatagcaccaacggcctgtgtggtgtagtgcaggtgccgggc
atgtccgaggcacagttggccgtgctgctcaaaacaccggtgctgcaggcgtccgcgtta
aaaaagcaccaggtccatctgatgcagcggctgggcaagctgcccgcgccgcccatgctg
gagaacctcgtcaccgtcagcggcatcccacctacggcctgcctgcacctgtcacccaac
ccgccagacctggcccacgtccggggcctgatccaggcgcaactgcgttttgagtaccag
ggctaccgtggctggtgggccgggcagggcacgacggtggtggccgatgggccgcaaggc
cgggcactgctacaccgcgatgccgagaccgaactggaggccatcacccggctgatgaac
atggggctggtgtcggcagagggcggcatcttcggcctgcccggcgatgcaccccaacac
acttggctgcaatgggccgatgccgactatgcccccctgcgtgcggccgggtttgaagtg
acgctggacgacgcgctgaaaagctggatcacccatgcggatgccctgcaggtgcagctg
cagccccagggccaaggccccacctccccttggtttgacctgtcactgggtatggagatc
aacggccagcgccacaacatcctgcccctgctgcccgacctgatcgccgccgcggccagc
agccccatcaataccgagaccggcctgccggagattccgccctatgtctacctgcccaac
cagcaggcggggcacggtgggtttatccgcctgcccacggacaccctcaaaccctggatg
gccgcgcttttggagttggtaggtgaccgcgcacatgacttcacgggcgacagcctcaag
ctctcgcgcctggacgccctgcgcatcaccgccgcgctgggcgaaggcgcggtgtgggac
ggtgccgcacacctgcgcgagatggtgcaacgcctcagtggccgcgccgaaatgcccgag
gtagcggtgccgacaggtgtgcacgcggaactgcgcccctaccaacagcaaggcctgaac
tggctgcagtttttgcgcgaacacggcctgggcggcatattggccgatgacatgggcctg
ggcaaaacgctgcaaaccctggcccacatccaggtcgaaaaagacgccggacgcctgaca
cacccggccctcatcattgcgcccgtcagcctgatgggcaactggcggcgcgaggccgaa
cgcttctgccccgaactgcgcacgctggtgctgcacggcaaggagcgccacgacgcggcc
cacgccatctccgaacacgacatcgtcattgctccctactcgctgctgcaacgcgacaag
gaacgctggctggaggcgcagtggcacatcgtggtgctggacgaggcgcaaaacatcaag
aacgccagcacccacgccgcgcaagtcgtaggccagttgcagacccaccaccggctgtgc
ctgtccggcacaccgatggaaaaccatctgggtgaaatttggagcctgttccattttctg
atgccgggttttctgggcagccaggcgcgcttcaaggagctgtttcgcacgcccatcgag
aagttgggcgaccccgaacgcctgcagcaactgcgcgcccgcatcacgccctttatgctg
cgccgcaccaaggccctggtggcccacgagctgccgcccaaggtggagacgattgagcgt
gtggagctgtcgggcaaacaggccgacctgtacgaaaccatacgcctgggcatggaaaaa
accgtgcgcgaggcgctgaacaccaaaggcctggccaagtcacaaatcacgatcctggac
gcgctgatgaagctgcgccaggtctgctgcgacccgcggttgctgaagctcgcggccgcg
caaaaagtcaagacctcggccaagctggagcagctgatggagctgctacctgaaatggtg
gccgaggggcggcgcattttgctgttctcgcagttcaccagcatgctgacattgatcgaa
gcggagctgaagcagcgtggcataccctgggtcaaactcaccggccaaagccagaaccgc
gatgcgttgatcgaacaattcaccagcggcgctgtgccgctgttcctgatcagcctgaag
gccggtggtgtgggactgaacctgccgcaggccgacaccgtgatccactacgacccgtgg
tggaacccggccgtggaaaaccaggccaccgaccgcgcccatcgcattggccagacacaa
accgtgtttgtctacaagctggtggcacagggcacgattgaggagcgcattctggcactg
caagagcgcaaggcggcgctggctgacagcatgtacagcgggtctaccgggcgcaaacaa
ccgctgtttaccgaaggggatttggcggagttgttgaagccgttgtcggagtag
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