Rhodoferax sp. AJA081-3: HZ993_14195
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Entry
HZ993_14195 CDS
T08330
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZ993_14195 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoa03019
]
HZ993_14195 (recQ)
03400 DNA repair and recombination proteins [BR:
rhoa03400
]
HZ993_14195 (recQ)
Enzymes [BR:
rhoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZ993_14195 (recQ)
Messenger RNA biogenesis [BR:
rhoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HZ993_14195 (recQ)
DNA repair and recombination proteins [BR:
rhoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZ993_14195 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QTN30612
UniProt:
A0A975I284
LinkDB
All DBs
Position
complement(3017762..3019609)
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AA seq
615 aa
AA seq
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MEEVFGYAQFRGPQQAIVEHVANGGDALVLMPTGGGKSLCYQIPAIARQRAGLGVALVIS
PLIALMHDQVGALHEAGVSAEFLNSTLSGEEAYQIEQRLLRGDITCLYAAPERVTNPRFL
ALLDSLYERNQLSLFAIDEAHCVSQWGHDFRPEYRALTVLHERYVGVPRMALTATADDLT
RADIVERLQLQDAEAFVSSFDRPNIRYTIVEKREAVQQLLRFIEREHEGDAGIVYCQSRK
KVEDVAQTLVDAGIRALPYHAGLDSKVRQVHQNRFLREEGIVMVATIAFGMGIDKPDVRF
VAHLDMPKNIEGYYQETGRAGRDGLPAYAWMGYGLQDVVNQRRMIDESPAGEEFKQALRG
KLDALLGLAEATDCRRVRLLAYFGEQLGDGPGYRCQNCDNCLNPPDIWDGTDAARKLLST
IYRIQQSSGMSFGAGHVMDILRGKTTEKVTQHGHTALSTFGLGAEFTEIQLRGVLRQLIA
MGAVAVDAEAFNTLRLTEQSRAVLRGEVQVQLRESVSTPASRNKSKRPGAGSAVVKAPIA
LDGEGLVRYAALKAWRAEVAREHNLPAYVIFHDATLAAIAKRAPQTLDDLQGISGIGAKK
LEAYAQEVLRVVNQG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
ctggaagaggtgttcggctatgcgcagtttcggggcccgcagcaggccatcgtcgaacac
gtggccaatggcggcgacgcgctggtgctgatgcccacggggggaggaaagtccctgtgt
taccagatcccggccattgcccgccagcgcgcggggctgggggtggcgctggtcatctcg
ccgctgattgcgctgatgcacgaccaggtgggcgccctgcacgaggcgggtgtcagcgca
gagttcctgaactcgacgctgagcggtgaagaggcctaccaaattgagcagcgcctgctg
cgcggcgacatcacctgcctctatgccgcgcccgagcgggtgaccaacccgcgttttctg
gcactgctggactcgctgtacgagcgcaaccagctgagcctgttcgccattgatgaggcg
cactgcgtcagccagtggggccacgatttccgccccgaataccgcgcgctgaccgtgttg
cacgagcggtatgtcggtgtgccgcgcatggcgctgaccgccacggccgacgacctgacc
cgtgccgacatcgtggagcgcctgcagttgcaggacgctgaagcctttgtcagcagcttt
gaccgcccgaatattcgttacaccatcgtcgagaagcgtgaggctgtgcagcaattgctg
cgcttcatcgagcgggagcatgaaggcgacgccggcatcgtctactgccagtcgcgtaaa
aaggtcgaagacgtagcgcagacgttggtggacgccggcatccgcgccttgccctaccac
gcggggctggacagcaaggtgcgccaggtccaccagaaccggtttttgcgggaagagggc
atcgttatggtcgccaccatcgcctttggaatgggcatcgacaagcccgacgtgcgtttt
gtcgcccacctggacatgcccaagaacattgaaggttattaccaggagacgggccgcgcc
gggcgggacggtttgccagcctacgcctggatgggttatggcctgcaagatgtcgtcaac
cagcgccgcatgatcgacgaaagcccggccggcgaggaatttaaacaggctctgcgcggc
aagctggatgcgctgctgggcctggccgaagcgaccgattgccgccgcgtgcggctgctg
gcctactttggcgagcaactgggtgatggcccgggctaccgttgccagaactgcgacaac
tgcctgaacccgcccgatatctgggacggtaccgacgcagcacgcaagttactcagcacc
atttaccgcatccaacagtccagcggtatgtcgttcggggctggccatgtgatggatatc
ttgcggggcaagaccactgaaaaggtcacccaacacggccatacggctttgagcaccttc
ggtctgggcgctgaattcaccgaaatccagctgcgcggcgtgctgcgccagctgatcgcc
atgggcgccgtggcggtggatgccgaggcttttaataccctgcgtttgaccgaacaatcc
cgcgccgtgctgcggggtgaagtccaggtgcaactaagggaatcggtctccacccccgca
agccgcaacaaaagcaaacgcccgggcgccggttcggccgtggtcaaggcgcccattgcg
ctggacggagagggtttggtgcggtacgcggccctgaaggcctggcgcgccgaggtggcg
cgggagcacaatttgcccgcttatgtgatttttcacgacgccacattggcggcgatcgcc
aaacgggcgcctcagaccttggacgatctgcagggtatcagcgggattggtgccaaaaaa
ctggaagcctatgcgcaagaggtgctgcgcgtggtgaaccagggctag
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