Rhodoferax sp. AJA081-3: HZ993_16510
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Entry
HZ993_16510 CDS
T08330
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HZ993_16510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoa02000
]
HZ993_16510
02044 Secretion system [BR:
rhoa02044
]
HZ993_16510
Transporters [BR:
rhoa02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HZ993_16510
Secretion system [BR:
rhoa02044
]
Type I secretion system
Adhesin protein transporter
HZ993_16510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
SLATT_1
AAA_29
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QTN26899
UniProt:
A0A975E7G9
LinkDB
All DBs
Position
complement(3538741..3540927)
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AA seq
728 aa
AA seq
DB search
MSDPLPSSSETASNPSARRIGEHSLRFDPLLDSVIAIAKIYGITTTLEALSAGLPLEGNR
ITPDLLPRAAGRAGLTAKLARRTLDALRPGLLPVVLLLKENQACVLLEWMPDGNARVRFP
ENGESADILTREELEHLYAGIVCFLRPVYKFDPRTPGSGELKSQHWFWSVVMQNWRLYRD
SLLAALLINIFALVMPLFSMTVYDRVVPNRAEETLWVLSIGVFLMMLFDTLLRVLRSYIL
DTAGKRIDVTLSARIMERVLGLGMADRPASVGSFAANLRAFESVREFVASATITTLVDIP
FVLVFFVVIAWISPWLVLPPLFCIVVLIVASMVVQQKMQELVEVTQRATSQRNATLVESL
VGIETVKFMVAESAFQRKWEQTTVFLAQTGTKLKLLSSTIMSMVQFLQQFVTVVVVIVGV
YLLVDNQLSMGGIIAASMLAGRAMAPFGQVAGLLMQYHNAKSGLASVEQHMKTQPERADA
SVFLHRNGFQGSIEFKNVSFSYPGQQQAVLRNVSFKIQAGEKIAFIGRVGSGKSTIQRLV
LGLYQPTEGAILIDGIDLRQIDPAELRRAAGFVSQDVSLFFGTLKENIALGAPFADDQDV
IAAAEVAGVTEFANRHPRGFDMLIGERGESLSGGQRQAVGIARAVLNDSPILLLDEPSSA
MDHQSEDLLKARLQRFTRGKTVILVTHRTSLLELVDRLIVLDNGKIMADGPKAQVVEALQ
SGRVGRAA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccccttgccaagcagcagtgagactgcgagcaacccgagtgccagacggata
ggtgagcacagcctgcgctttgacccgctgctggacagcgtcatcgccattgccaagatt
tacggcatcaccaccacactggaagccctgtcggcagggctaccgctggagggcaaccgc
atcacgcccgacctgttgccacgtgcggcgggccgcgccggcctaaccgccaagctggca
cgccgcacgctggacgcgctgcgccccgggctgctgcccgtggtgctgttgctaaaggaa
aaccaggcctgcgtgttgctggagtggatgccggacggaaacgcccgggtccgcttcccg
gagaacggggagtcggccgacatcctgacccgcgaggagctggaacacctgtacgccggc
atcgtctgctttctgcggccggtctacaagttcgatccgcgcacgccgggcagtggtgag
ctcaagtcccaacactggttctggagcgtggtcatgcagaactggcggctgtaccgcgac
agcctgctggcagcattgctgatcaatatttttgcgctggtcatgcccctgttttccatg
acggtgtatgaccgcgtggtgcccaaccgtgccgaggagaccctgtgggtgttgtccatc
ggcgttttcctgatgatgctgtttgacaccctgctgcgggtgttgcgctcttacatactg
gatacggcgggtaaacgcatcgacgtcacactgtcggcccgcatcatggagcgtgtgctg
gggttgggcatggcggaccgtccggcgtcggtgggttcgtttgctgccaacctgcgggcg
tttgagtcggtgcgggagtttgtcgcatcggccacgatcacgaccctggtggacattccc
tttgtgttggtgttttttgtggtgattgcgtggatttcaccctggctggtgttgcctccg
ctgttttgtattgtggtgctgatcgtggcctcgatggtggtgcagcaaaaaatgcaggag
ctggttgaggtgacccaacgggccacgtcgcagcgcaatgccaccctggtggagagcctg
gtcggcattgagaccgtgaagttcatggtggccgaaagcgcctttcagcgcaaatgggag
cagaccacggtgtttctggcgcagacgggcaccaagctgaagctgctgtcctccaccatc
atgagcatggtgcagtttctgcagcaattcgtcaccgtggtggtggtcattgtgggtgtg
tacctgctggtcgacaaccagttgagcatgggtggcatcatcgccgcctccatgctggcg
ggccgggccatggcgccgtttgggcaggtggcaggcttgctgatgcagtaccacaatgcc
aagagtggtctggcatcggtcgagcagcacatgaaaacccagcccgagcgtgccgatgct
tcggtcttcttgcacagaaacgggttccagggctccattgagttcaaaaacgtcagcttc
tcctacccgggccagcaacaagcggtgttgcgcaacgtgtcgttcaagatacaggcgggg
gaaaagattgcctttatcggccgggtaggttcgggcaagtccaccatccagcgcctggtg
ctggggctgtaccagccgaccgagggcgctatcctgattgacggtattgacctacggcaa
attgaccccgctgagctgcgccgtgcggcaggttttgtatcgcaggacgtcagcctgttt
tttggcacactgaaggaaaacatcgcgctgggcgcaccgtttgccgatgaccaggatgtg
atcgccgcggccgaagtggcgggtgtcaccgaatttgccaaccgccatccgcggggtttt
gacatgttgattggtgagcggggggagtccctctcgggcggtcaacggcaggcagtgggt
attgcccgcgccgtgctgaacgactcacctatcctgctgctggacgaacccagcagcgcc
atggaccaccagagcgaagacctgctcaaggccaggctgcagcgtttcacccggggcaaa
accgtgatcctggtcacccaccgcacatcgctgctggaactggtggaccggcttattgtt
ttggacaacggaaaaatcatggccgatggtcccaaagcccaggtcgtggaagcgctgcaa
agcggcagagtaggcagggccgcctga
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