Rhodoferax sp. AJA081-3: HZ993_17600
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Entry
HZ993_17600 CDS
T08330
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
rhoa
Rhodoferax sp. AJA081-3
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QTN27101
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Position
complement(3744317..3746143)
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AA seq
608 aa
AA seq
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MPPSKRISLADVARATGTTLGNFDSTAVAKAMGSFTSTQVGGGLPPSAAHPSVADISECL
FFSPGDGRIWLQDQRMVLLHTEALGSLRREMIDSLGQERARGLFTRAGYVSGARDAQMVR
KQWPDADPLAAAIAGTRLHALEGVVKVELVRASYDPDTSRYEGEFLWHNASEDDEHIAAY
GIGGSPACWMQVGYATGYVSTLLGCLVVFREIECRSMGDAHCRVLGKSAELWDDVEEDMR
YLNAKEFVDTAAYARPAASAAELPTAAVAGDAMVGASSAFNAACHQLSRVARTSATVLFT
GESGVGKEKFASMLHKISPRKDQPFVAVNCAAIPDTLIESELFGVERGAYTGASQSRPGR
FERASGGTLFLDEIGTLSFVAQGKLLRALQEGEIERVGGTRSIAVDVRVVAATNEALRQA
VRNGTFREDLFFRLNVFPIHLPPLRERRDDIPLLMNHFLNHYRHKHACQVRGFSQAAVRA
LLNYDFPGNIRELQNLVERAVITADTDGLIDLHHLFTSGETLSEEVMTLRLQAGSGTLNL
NAARVVPETGSDSNGSSKPGPQTLEQTEIETLQRAITAAHGNLSAAARLLNTTRPKLAYR
ARKHGLID
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgccaccctccaagcggatatccctggccgatgtggcccgtgccaccggcaccaccttg
ggtaatttcgacagcacagccgtggccaaggccatgggcagcttcaccagcacccaagtc
ggcggcggtcttccacccagcgcggcccaccccagcgtggccgacatcagcgaatgcctg
ttcttctcacccggtgacgggcgcatctggctgcaagaccagcgcatggtgctgctgcac
accgaggccctgggctcgctgcgccgcgaaatgatcgacagcctgggccaggagcgcgcc
cgcggcctcttcacgcgcgcgggatacgtgagcggcgcgcgcgacgcacaaatggtgcgc
aaacaatggcccgacgcagacccgctggccgctgccattgccggcacgcgcctgcatgcg
ctggagggcgtggtgaaggtggaactggtgcgtgcgtcctacgaccccgacaccagccgc
tacgaaggtgaattcctgtggcacaacgccagtgaggacgacgaacacattgccgcctac
ggcattggcggctcaccggcctgctggatgcaggtggggtatgccaccggatatgtcagc
acactgctcggctgcctggtggtgttccgcgaaatcgagtgccgctccatgggcgacgca
cattgccgcgtgctgggcaaatcggccgagctgtgggacgacgtggaagaggacatgcgt
tacctcaacgccaaggagtttgtcgacaccgccgcatatgcgcgcccggccgccagcgcc
gccgagttacccacggctgctgtggccggagatgccatggtgggcgcctcgtccgccttc
aacgcggcctgccaccaattgagccgcgtggcccgcacatcggccacggtgctgttcacc
ggtgagtccggcgtgggcaaggaaaaatttgccagcatgttgcacaagatcagcccacgt
aaggaccaaccgtttgtggccgttaactgcgcggcgattccggacacgctgatcgaatcc
gagctgtttggcgtggagcgcggcgcttacaccggggccagccagtcgcggcctggccgg
tttgaacgcgccagtggcggcaccttgtttctggatgaaatcggcacgctgagttttgtg
gcccagggcaagctgctgcgtgcgctgcaagagggcgagatcgaacgcgtgggcggcaca
cgcagcattgcggtcgatgtgcgtgtggtggccgccaccaacgaagccctgcgccaggcc
gtgcgcaacggcaccttccgcgaggatctgttctttcgcctcaacgtgtttcccatccac
ctgccgccactgcgtgagcgccgcgacgacatccccctgctgatgaaccacttcttgaac
cactaccggcacaaacatgcctgccaggtgcgcggcttcagccaggccgccgtgcgggcg
ctgctgaactatgactttccgggcaatatccgcgagctgcaaaacttggtagaacgcgcc
gtgatcacggcggatacagacggcctgatcgacctgcaccacctgttcaccagcggtgag
accttgagcgaagaggtgatgaccctgcggctgcaagccggctcgggcacgctgaaccta
aatgcggcgcgggttgtacccgaaacaggtagtgacagcaatggcagtagcaaaccgggg
ccccagacactggagcaaaccgagattgagaccttgcagcgcgccatcaccgccgcacac
ggcaacctgtccgccgcagcacggttgctgaacaccacacggcccaagctggcgtaccgg
gcgcgcaagcatgggttgattgactga
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