Rhodoferax sp. AJA081-3: HZ993_18535
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Entry
HZ993_18535 CDS
T08330
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa00240
Pyrimidine metabolism
rhoa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HZ993_18535
Enzymes [BR:
rhoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
HZ993_18535
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
QTN27270
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All DBs
Position
complement(3948943..3949875)
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AA seq
310 aa
AA seq
DB search
MTNTNTNTYLDIHPEVAHALAHNQPVVALESTIISHGMPYPQNVATALEVEAEVRKHGAV
PATIAIIGGRLKAGLTPAEIEVLGTTGRSVTKVSRRDIPFIVAAGATGATTVASTMVIAA
MAGIRVFATGGIGGVHRGAETSFDVSADLQELAQTPVAVVCAGAKSILDLRLTLEYLETH
GVPVVGYQTPWLPAFFTRDSAFKVDYQLDTPQAIAKVMFAKWAMGLRGGLVVANPIPETF
AMPRAAIDAAVEQALQEAQAQGIGGKESTPFLLARVCELTGGDSLAANIQLVLNNARLAS
AVAQAYGAIT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacacaaacacgaacacctatctcgacatccatcccgaggttgcccacgccctg
gcacacaaccagcccgtggtggccctggagtccaccatcatctcgcacggcatgccctac
ccgcagaacgtggcgactgctttggaggtggaagccgaagtgcgcaaacacggtgccgtg
ccggccaccatcgccatcatcggcggacggctcaaggcgggtttgacgccagccgagatc
gaagtgctgggcactacgggccgcagcgtgaccaaggtcagccgacgcgatattcccttc
atcgtggcagcgggtgccaccggtgcgaccaccgtggcgtccacgatggtgattgccgcc
atggccggcatacgcgtatttgccaccggtggcataggcggagtgcaccgcggtgccgag
accagctttgacgtatcggctgatttgcaggagctggcacagacgccggtggccgtggtc
tgcgccggtgccaagtccattctggacctgcgcctgacgctggaatatctggagacccat
ggtgtgccggtggtcggttaccagaccccatggctgcccgccttctttacccgcgacagc
gccttcaaggtggactaccagctggacacgccgcaggccatcgccaaggtcatgtttgcc
aagtgggccatgggcctgcgcggtggtttggtagtggccaacccgatccccgagaccttt
gccatgccccgcgccgccattgatgcggcggtggagcaggcgctgcaggaggcacaggcc
caaggcatcggtggcaaggaatcgacgcccttcctgctggcccgggtctgcgaattgacc
ggtggcgacagcctggccgccaacatccaactggtgctgaacaacgcccgactggcgtcc
gcagtggcccaggcctacggagcaatcacctag
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