Rhodoferax sp. AJA081-3: HZ993_19250
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Entry
HZ993_19250 CDS
T08330
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoa03016
]
HZ993_19250 (miaB)
Enzymes [BR:
rhoa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HZ993_19250 (miaB)
Transfer RNA biogenesis [BR:
rhoa03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HZ993_19250 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Fer4_12
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QTN27389
UniProt:
A0A975E8C3
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All DBs
Position
complement(4102342..4103709)
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AA seq
455 aa
AA seq
DB search
MTDHKKVFIKTFGCQMNEYDSDKMADVLGAAQGYTSTQNVEEADLILFNTCSVREKAQEK
VFSDLGRVRHLAKKGVLIGVGGCVASQEGAEIIKRAPFVDVVFGPQTLHRLPDMLNARKA
LNKPQVDISFPEIEKFDHLPPAKVEGASAFVSIMEGCNKYCSYCVVPYTRGTEINRPFED
VLVEVAGLADQGVKEITLLGQNVNAWRAPMVSNTSVAAMGGEMADFATLLEYVADIPGIE
RIRYTTSHPNEFTPSLIAAYDKIPKLVSHLHLPVQHGSDKILMAMKRGYTAMEYKSTVRK
IRAIRPDMAMSSDFIVGFPGETEDDFNKMMKLIDDIGFDNSFSFIFSPRPGTPAANLHDD
TPHDVKLRRLQHLQAAINANITRISESRLNTVQRILVEGASKRDGGELMGRTECNRVVNF
AGQPRLVGQLVDVRITETRSYTLRGEVVTSEAVSA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccacaaaaaagtattcatcaaaacctttggctgccagatgaacgagtacgac
tcggacaagatggccgacgtgctgggcgccgcccagggctacacatccacacaaaacgtg
gaagaagctgatctgattttgttcaacacctgctcggtgcgcgaaaaggcgcaggagaaa
gtgttttccgacctgggccgtgtgcgccatctggccaagaagggcgtgctgatcggcgtg
ggcggctgtgtcgccagccaggaaggtgcagagatcatcaaacgcgcgccctttgtggac
gtggtgtttggcccgcagaccctgcaccgcctgcccgacatgctgaacgcgcgcaaggcg
cttaacaagccgcaggtggacatcagcttccccgagatcgaaaagttcgaccacctgccg
cccgccaaggtggaaggcgcgtcggcctttgtgtccatcatggaaggctgcaacaaatac
tgcagttactgtgtggtgccctacacccgtggcaccgagatcaaccgcccgtttgaagac
gtgctggttgaagtggcgggcctggcagaccagggcgtcaaggaaatcacgctcctgggc
caaaacgtgaacgcctggagagcaccaatggtcagcaacacaagcgttgcggccatgggc
ggcgagatggccgattttgcaacccttctggaatacgtggccgacatccccggcatcgaa
cgcatccgttacacgaccagccaccccaacgagttcacgccctcgttgatcgcggcctac
gacaagatccccaagctggtcagccatttgcacctgcccgtgcagcacggcagcgacaag
attctgatggccatgaaacgcggctacacggccatggagtacaagagcacggtgcgcaag
atacgcgccatccgccccgatatggcgatgagttcggatttcattgtgggtttccccggt
gaaaccgaggacgatttcaacaagatgatgaagctgatcgacgacatcggctttgacaac
tctttcagcttcatcttcagcccccgccccggcacgccggccgccaacctgcacgacgac
acgccgcacgatgtgaagctgcgccgcctgcagcacctgcaagccgccatcaacgccaac
atcacccgcatctccgagagccgcctgaacacggtgcagcgcattttggtggagggcgcc
agcaaacgcgatggcggtgaactgatgggtcgcaccgagtgcaaccgcgttgtgaacttt
gccggccagccgcggctggtggggcaactggtggatgtgcggattaccgagacgcgcagc
tatacgttgcgaggagaagtggtgaccagcgaggcggtttcggcctga
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