Rhodoferax sp. AJA081-3: HZ993_19690
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Entry
HZ993_19690 CDS
T08330
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rhoa
Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhoa03021
]
HZ993_19690 (rpoH)
Transcription machinery [BR:
rhoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HZ993_19690 (rpoH)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QTN27470
UniProt:
A0A975E8J8
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Position
complement(4190311..4191252)
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AA seq
313 aa
AA seq
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MSYQIGPSTAAVALANPWSVVPSLGNLDAYISAANRLPMLTLEEEQAFARKFKTDNDVEA
AGKLVLSHLRLVVSVSRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYALHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQRFKSEDAAADLGTHRDTLNPEQIDA
MARELKVKPEEVIEMETRMSGGDVLLDPSPSDDGEDAFGPIAYLTDTNHEPVAMIEAHQR
DVLATDGIAAALEGLDARSRRIVEERWLKVNDDNSGGMTLHELAAEYGVSAERIRQIEVA
AMKKMKTTLAAYA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccaaattggaccttccaccgcagccgtagcactggccaacccctggtcggtt
gtgccatcgctggggaacttggacgcctatatctcggcggccaaccgcctgcccatgctg
acgctcgaagaagagcaggcttttgcacgcaagttcaagactgacaacgatgttgaggct
gccggtaagttagtgctctctcacttgcgactggtggtgtccgtatcccgccagtacctg
ggttacggcctgccccacggcgacctgatccaggaaggcaatgtgggcctgatgaaggcc
gtcaaacgcttcgaccccgaccagggcgtgcgtttggtcagttatgcgctgcactggatc
aaggccgaaatccacgaatacatcctgaagaactggcgcatggtcaaagtggcgaccacc
aaggcccagcgcaagctattcttcaacctgcggtccatgaagcagcgcttcaaaagtgaa
gacgccgcggccgacctgggtacccaccgcgacacgctgaaccccgagcagatcgatgcc
atggcgcgtgaactcaaggtcaagcctgaagaggtcatcgaaatggaaacccgcatgtcg
ggtggcgacgtgttgctggacccctctccatcagacgacggtgaggatgcctttggcccc
attgcctacctgaccgataccaaccacgagcctgttgccatgatcgaggcgcaccagcgc
gacgtgctggccacggacggcattgccgcagccctggaaggcctggacgcccgcagccgc
cgcatcgtggaagagcgttggctcaaggtcaacgacgacaactcgggtggcatgaccttg
cacgaactggccgccgagtacggcgtcagcgccgagcgcatccgccagattgaagtggcc
gccatgaagaagatgaagaccaccttggccgcgtacgcctga
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