Rhodoferax sp. AJA081-3: HZ993_20200
Help
Entry
HZ993_20200 CDS
T08330
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
rhoa
Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
HZ993_20200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_YknX
RND-MFP_C
Beta-barrel_RND_2
BSH_CusB
BSH_RND
Biotin_lipoyl
CzcB_C
BSH_YknX
BSH_CzcB
YknX_C
HH_EMRA
Beta-barrel_AprE
TP096X_C
PYNP_C
HH_MFP_RND
NQRA_N
Peptidase_M23
BSH_LcnD
DUF6791
Rap1a
Motif
Other DBs
NCBI-ProteinID:
QTN27562
LinkDB
All DBs
Position
4331668..4332831
Genome browser
AA seq
387 aa
AA seq
DB search
MSSTLIRRLLLALLVLGLLGAGIWWAKRTKPVAVLVTTIDQGRVESSIANTRAGTVEACM
RTKLSATMGGRIEVLAVKEGDKVKKGQLLMKLWNDDQQAQSSLAMAQVETARKRVVEACT
VAANAEREAERQTTLFKQGFISGSRDEQARSEAQARRAGCDAAKADVAQTQARVNATRVE
QNRTVLYAPFAGTVAKIVGEVGEYSTPSPPGVPTPPAIDLIDDTCLYVRAPMDEVDAPKI
SAGQTVRISFDALPKQSFPGKVKRVAPYVSAVEKQARTVDIEATLDIAADKTSPRLLVGY
SADVEVVLALRESVVRVPTSALQEGGRVLLAGADGTLQERKLKTGLANWEYTEVLEGLAA
GDKVVTSLEREGVKPGAHFVVDEKQKK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaccctgatccgccgccttttgcttgcacttttggtcctgggcctgctgggt
gcaggcatttggtgggccaaacgcaccaaaccggtggccgtgctggtgaccaccattgac
cagggccgggtcgaatccagcattgccaacacccgcgccggcacggtcgaggcctgcatg
cgcaccaagctctccgccaccatgggtgggcgcattgaggtgttggcggtcaaagagggt
gacaaggtcaaaaaaggccagctgctgatgaagctgtggaacgacgaccagcaggcccaa
agcagtttggccatggcccaggtagagacggcgcgcaaacgcgtggtcgaggcctgcacc
gtggcagccaacgccgagcgcgaggccgagcggcagaccacgctgttcaaacaaggtttt
atctccggctcgcgtgacgaacaggcccgctccgaggcacaggcccgccgcgccgggtgc
gacgccgccaaggccgatgtggcccagacccaggcccgtgtcaacgccacacgcgtggag
caaaaccgcaccgtgttgtatgcaccctttgccggcaccgtggccaagatcgtgggcgag
gtgggtgaatattccactccgtccccacccggtgtgcccactccaccggctattgatctg
attgacgacacctgcctctatgtgcgcgcacccatggacgaggtggatgcgcccaagatc
agcgccgggcaaaccgtgcgcatcagcttcgatgccctgcccaaacagtctttccccggc
aaggtcaagcgcgtggcaccgtatgtgtcggcggtggagaagcaggcccgcacggtagat
attgaagccacactggacattgccgcagacaaaacttcaccccgcctgctggtgggctac
agcgccgacgtggaagtggtgctggccctgcgcgagagcgtggtgcgcgtgcccacctcg
gccttgcaggaaggcggccgcgtgctgctggcaggtgcagacggcaccttgcaggaacgc
aagctcaagaccggcctggccaactgggagtacaccgaggtgctcgaaggcctggcggcc
ggtgacaaggtggtgacctcgttggagcgcgaaggtgtcaagccgggtgcacatttcgtt
gtggacgaaaagcaaaagaaatga
DBGET
integrated database retrieval system
