Rhodoferax sp. AJA081-3: HZ993_21730
Help
Entry
HZ993_21730 CDS
T08330
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa00061
Fatty acid biosynthesis
rhoa00071
Fatty acid degradation
rhoa01100
Metabolic pathways
rhoa01212
Fatty acid metabolism
rhoa02024
Quorum sensing
rhoa04146
Peroxisome
Module
rhoa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HZ993_21730
00071 Fatty acid degradation
HZ993_21730
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HZ993_21730
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZ993_21730
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhoa01004
]
HZ993_21730
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoa04147
]
HZ993_21730
Enzymes [BR:
rhoa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HZ993_21730
Lipid biosynthesis proteins [BR:
rhoa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HZ993_21730
Exosome [BR:
rhoa04147
]
Exosomal proteins
Exosomal proteins of breast milk
HZ993_21730
Exosomal proteins of breast cancer cells
HZ993_21730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QTN27845
UniProt:
A0A975E9A7
LinkDB
All DBs
Position
complement(4646871..4648559)
Genome browser
AA seq
562 aa
AA seq
DB search
MTEPVNVLPSDLPLQCLYRWERERGDQIFLTQPMGAGQVQEITWAQAADQARRIATWLQA
QGWPEGSRVAIIGKNSAHWILADLAILMAGYVSVPIYPTFNGEALAYILAHSEAKACFVG
KMDGVENLETGIPADMPLITMPLAPMRKSLLWTDLLAHNAPLAGTPAPPMDALCTIIYTS
GTTGKPKGVVQTFRAIAWALSSATRRVQMGDSERYISYLPLAHVAERMLIEQGALRFGGH
IFFAESLDTFVQDLQRARPTVFFSVPRLWVKFQQGVFAKMPADKLKRLLGIPLIGGLVRR
KILKGLGLDQCRIAAGGAAPMPADVLQWYRKLGLDLIEVYGMTENCGVSHATLPGGRDTG
SVGLPYDGIESRIDPTTGEIQMRSNALMQGYYKDASATADAMTADGWLRTGDKGKIDAQG
NLSITGRVKDIFKTSKGKYVAPAPIEDLLVLHPDIEACAVTGANLSQPLALVMLSQDAVA
RCASADAKAALTESLTRHLATVNAKLEPHEKLDCLAAISTAWTPENGFVTPTLKVKRMVV
EDAYANQYEGWLAQRKPVVWAG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccgtgaacgttttgcccagcgacctgcccctgcaatgcctgtaccgctgg
gagcgcgagcgtggtgaccagatttttctgacccaacccatgggtgcgggccaggtgcag
gagatcacctgggcacaggccgccgaccaggcccggcgtattgccacctggctgcaggcc
caaggctggcccgagggcagccgcgtggccatcatcggcaagaatagcgcgcactggata
ctggctgacctggccattctgatggcgggttatgtgtcggtgcccatctaccccaccttc
aacggcgaggcgctggcctacatcctggcgcacagtgaggccaaggcctgctttgtgggc
aagatggatggggtggagaatttggagaccggcatacccgccgacatgccgctgatcacc
atgccgctggcacccatgcgcaagtcgctgttgtggaccgacctgctggcccacaacgcg
ccactggctggcacgccggcaccgcccatggatgccctgtgcaccatcatctatacatcg
ggcaccaccggcaaacccaagggtgtggtgcagaccttccgcgccattgcctgggccctg
agctcggcaacccgccgcgtgcagatgggcgacagcgaacgctacatctcctacctgcca
ttggcccacgtggccgaacgcatgttgatcgaacagggcgcgctgcgttttggtggccat
atcttttttgccgaatcgctggacacctttgtgcaggatctgcagcgggcgcggcccacg
gtgtttttctcggtaccgcggctgtgggtcaagttccagcagggggtgtttgccaagatg
ccggcagacaaactcaagcgcctactgggcattccgctgattggtggcctggtgcggcgc
aagatcctcaagggcctgggcctggaccagtgccgcatcgccgcgggcggcgcagcgccc
atgccggccgatgtgttgcagtggtaccgcaagctgggcctggacctgatcgaggtctat
ggcatgaccgagaactgcggcgtctcccacgccacgctgccaggcgggcgcgacaccggc
tcggtgggcctgccttatgacggtatcgagagccgcatagacccgaccaccggcgaaatc
cagatgcgcagtaacgcgctgatgcagggctactacaaagacgcatcggccaccgcagac
gcgatgacggccgacggatggttgcgcacgggggacaagggcaagatcgacgcacagggc
aacctgagcatcaccggccgggtcaaagacatcttcaagacgagcaagggcaaatacgtg
gcgcctgcgccgattgaagacctgctggtattgcaccccgacattgaagcctgcgctgtc
actggggccaacctctcgcaaccactggccctggtcatgttgtcgcaagatgcggtggcg
cgttgtgcgtccgcagacgccaaggccgcactgaccgaatcactcacacggcacctggcc
acggtgaatgccaagctggagccgcatgagaagctggattgcctggcggccatcagcacg
gcctggacacccgagaatgggtttgtaacccccacactcaaggtcaaacgcatggttgtg
gaagacgcttatgccaaccagtatgaaggctggttggcgcagcgcaagcccgtggtctgg
gccggttga
DBGET
integrated database retrieval system
