Rhodoferax sp. AJA081-3: HZ993_22025
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Entry
HZ993_22025 CDS
T08330
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhoa03009
]
HZ993_22025
Enzymes [BR:
rhoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HZ993_22025
Ribosome biogenesis [BR:
rhoa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HZ993_22025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Ubie_methyltran
MTS
Methyltransf_31
Methyltransf_25
Methyltr_RsmF_N
GCD14
Cons_hypoth95
TRM5-TYW2_MTfase
GH3_N_vert
Methyltransf_5
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
QTN27901
LinkDB
All DBs
Position
4708054..4709325
Genome browser
AA seq
423 aa
AA seq
DB search
MHPKALLDACAELVRLTLKFDHPADAIVSRFFRDNRGLGPRERATMAETVYTVLRKKLLF
DHLAPSGSGPKERRLAILGFYGPGDFLRSALSEQEINWLDQCEKVSPHDLMERHRHNLPE
WLVEPLKAQLGAEFWPLVETLNLGAGLDLRVNTFKTKRADVQKELAKAGIKAVNTPYSPW
GLRIAGKPALNKNDAFVRGEFEVQDEGSQLLSMLLDAKRGEMVVDFCAGAGGKTLALGAA
MRSTGRLYAFDTSAHRLDAFKSRLKRSGLSNVHPAAIAHERDDRVKRLTGKMDRVLVDAP
CTGLGTLRRNPDLKWRQNMQAVEEMAVKQTAILQSAARMLKPGGRLVYATCSVLPQENEA
IAEAFSAANPEFEPLAAGDLLAELKVENAATLCSGGEAGQLYLRLWPHRHATDGFFAAVW
QKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcacccaaaagctctcttagacgcctgcgccgaactggtcaggctcacccttaaattc
gaccaccctgcggacgccatcgtgtcgcgctttttccgcgacaaccggggcctggggccg
cgtgaacgcgccaccatggccgaaacggtttacaccgtgctgcgcaaaaagctgttgttt
gaccacctggcaccctcgggcagcggccccaaagagcgccgcctggccattctgggcttt
tacggtccgggcgacttcctgcgtagcgccttgagcgagcaggaaatcaactggctggac
cagtgcgaaaaggttagcccccatgacttgatggagcgccaccgccacaacctgcctgag
tggctggttgagccactcaaagcgcagttgggcgcggagttctggcctctggtcgagacc
ctgaatctgggcgcagggcttgatttgcgggtcaatactttcaagacaaaacgtgccgac
gtacaaaaagagttggccaaggcgggtatcaaggccgtcaacacaccgtattccccttgg
ggcctgcgcattgctggcaaaccggcgctgaacaagaacgatgcctttgtgcgcggcgag
ttcgaggtgcaggacgaaggttcgcagttgctgtccatgttgttggatgccaagcgcggc
gagatggtggtcgacttttgcgccggcgccggtggcaagaccttggcgttgggagcggcc
atgcgcagcaccggtcgcctgtacgcctttgacacctctgcccaccggctggatgccttc
aagtcgcgcctcaagcgcagcggtttgtccaatgtgcaccccgcagccattgcccatgag
cgggatgaccgcgtcaaacgcctgacgggcaagatggaccgggtgctggtggatgcaccc
tgtaccggcttgggtacgctgcgtcgcaatcccgacttgaagtggcgccagaacatgcag
gcagtggaggaaatggcagtcaaacagacggccatcctgcaaagcgccgcgcgcatgttg
aaacccggcggccgcctggtgtatgccacctgcagcgtgctgccccaggagaacgaggcc
attgccgaagcattttcggccgccaaccccgagttcgagcccttggcagccggtgacctg
ctggcagagctgaaggtggaaaacgctgccaccttgtgcagcggtggcgaggccggtcag
ctgtacctgcgcctgtggccgcaccggcacgcgacagacggcttttttgctgcagtgtgg
caaaagaaataa
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