Rhodoferax sp. AJA081-3: HZ993_23920
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Entry
HZ993_23920 CDS
T08330
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HZ993_23920 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoa03400
]
HZ993_23920 (mutS)
DNA repair and recombination proteins [BR:
rhoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HZ993_23920 (mutS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-ProteinID:
QTN30763
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Position
complement(5114460..5117162)
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AA seq
900 aa
AA seq
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MMQQYLGLKAAHPNTLLFYRMGDFYEMFYGDAEKAARLLDITLTQRGQSAGEPVVMAGVP
FHAMEGYLAKLIRHGESVAICEQVGEVTGKGPVERKVVRVVTPGTLVDAELLSEKSESVL
MAVHQGPRNRCGLAWLSVTQGVVHLAECTPDAVPEWVARVSPSELAYSAGATQAFEDRLK
RLRMTSSGTNPLYTTARPEWQFDPALGQRKLLDALQAASLASWNAQDLPLAHAACAALLG
YAEHTQGRALTHISAVQVQRDGELIDLPPTTRRNLELVQTLRGEDSPTLFSLLDTCMTGM
GSRMLKSWLLTPRRDRAQAQQRLDAIATLRSGTLQSSSLALWQGLRLQLKGSADVERITA
RTALRQVRPRELVALVVTLQKTEHLAQHLRGLEGYLAADSAPCHPPATRAPSLPAQSPQP
NSLPEGLLSGIALDLLPPPDCAALLLQAIAAEPAALVRDGGVIATGFDAELDELRAIQTN
CDDFLLDLETRERARTGISNLRVQFNKVHGFYIEVTQGQADKVPDDYRRRQTLKNAERFI
TPELKAFEDKALSAQERALAREKWLFEQVLDRLQAFVPVLTRTARALAALDALCALAERS
LTLDWCAPKFAVEPCIDITQGRHPVVQARLAELSSGNFIANDTRLGPKQRLQIITGPNMG
GKSTYMRQVALIVLLASVGSYVPAAACRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAA
QILHAATPHSLVLMDEIGRGTSTFDGLALASAIATQLHDKTQAFTLFATHYFELTEFPAT
HHSALNVHVSATESGRDIVFLHEIQSGPASKSYGIQVARLAGMPAGVLNQARHTLDALEL
QATESQAQVDLFAAPPAAETIAASALDMRLAAINPDALSPREALEALYQLKALAGGSSGN
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagtaccttggtctcaaggctgcgcaccccaacaccctgctcttctaccgc
atgggtgatttttacgagatgttttatggcgatgccgagaaggccgcgcgcttgctggac
atcacgctgacccaacgcggccagtctgctggtgagccggtggtcatggccggtgtgccc
ttccacgccatggagggttacctggccaagctgattcgccacggtgaatcggtcgccatc
tgtgaacaggtgggcgaagtcaccggcaagggcccagtggagcgcaaagtggtacgtgtc
gtaacccccggcacgctggtcgatgccgagttgctcagcgaaaagtccgaatccgtgctg
atggccgtgcaccagggcccgcgcaaccgctgcggcctggcctggctcagtgtgacccag
ggcgtggtgcacctggccgaatgcacgcctgacgccgtgcccgagtgggtggcccgtgtc
agccccagcgaactggcctacagcgccggtgccacccaggcctttgaagaccggctcaag
cgcctgcgcatgaccagtagtggcaccaacccgctgtacaccaccgccagacccgaatgg
cagtttgaccccgcactgggccagcgcaagctgctggacgcattgcaagccgccagcctg
gccagctggaatgcccaagacctgccgctggcccacgccgcctgcgccgcactgctgggt
tatgccgaacacacccagggtcgcgcgctgacccacatcagcgccgtgcaggtgcagcgt
gatggtgaattgatcgacctgccgcctaccacccggcgcaacctggaactggtccagacc
ctgcgcggcgaagactcgcccacgctgttctcgttgttggacacctgcatgaccggcatg
ggcagccgcatgctcaagagctggctgctgacgccccggcgcgaccgcgcgcaggcgcaa
cagcggctggatgcgattgccacactgcgcagcggcactttacagtcgtcatcgctggcg
ctgtggcagggcctgcgcctgcaactgaagggcagcgcggatgtggaacgtatcacggcc
cgcactgcgctgcgccaggtgcgaccgcgcgaactggttgccctggtggttacgctacaa
aaaacagagcatcttgcgcagcatttgcggggactggaaggctatttggctgcggactct
gctccgtgtcacccgcccgctacgcgggctccttctttacctgcgcagagtccgcagcca
aatagccttcccgaggggctgctgtctggcattgcgctcgacctgttgcctccgccggac
tgcgccgccctgctgctgcaggctattgccgccgagcccgcagccctggtgcgcgacggt
ggtgtcatcgccaccggttttgatgccgagctggacgagctgcgtgccatccagaccaac
tgcgacgactttttgctggacttggagacccgcgagcgggcccgcaccggcatcagcaac
ctgcgcgtgcagttcaacaaggtgcatggtttctatatagaagtgacccagggccaggcc
gacaaggtgcccgacgactaccgccgccgccagactttgaaaaatgccgaacgcttcatc
acccccgagctgaaggcgtttgaagacaaggccttgagcgcccaggagcgcgcgctggcg
cgggagaagtggctgtttgagcaggtgctggaccgccttcaggcctttgtgcccgtgctg
acccgcacggcgcgtgcgctggccgcgctggatgcactgtgtgcgctggccgaacgttca
ctgacgctggactggtgtgcaccgaagtttgcggtggagccctgcatagacatcacccag
ggccgtcacccggtggtccaggcgcggctggccgaactgtccagcggcaacttcattgcc
aacgacacgcgcctgggtcccaagcagcgattgcagatcatcaccggccccaatatgggt
ggtaaatccacctatatgcgccaggtcgcgctgatcgtgctgttggcatcggttggcagt
tatgtgcccgcagccgcctgccgcctggggccgatcgacgccatccacacccgcatcggc
gcggcagacgacctggccaacgcccagtccaccttcatgctggagatgaccgaggccgcg
caaatcctgcacgcggccacgccccattccttggtgctgatggacgagattggccgcggc
acctccacctttgacggcctggccctggcatcggccattgccacacagctgcacgacaag
acccaggccttcacgctgtttgccacacactacttcgagctgaccgaattccctgccacc
caccacagcgcgctgaatgtgcacgtgagcgccaccgagtcgggccgcgacatcgtcttc
ctgcacgaaatccagagtggcccggccagcaagagttatggcatacaggtggcccgcctg
gcaggcatgcccgccggggtgctgaaccaggcgcgccacacactggacgctctggagcta
caggccacggaatcccaggcccaggtggatttgtttgccgcgccccccgctgccgaaacc
attgccgcttcggcgctggatatgcgcctggcagctatcaacccggatgccttgagcccg
cgggaggcgctggaggcgctgtaccagctgaaggctttggcgggcggaagcagtggcaac
tag
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