Rhodoferax sp. BAB1: HTY51_00535
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Entry
HTY51_00535 CDS
T08955
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhob
Rhodoferax sp. BAB1
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhob03400
]
HTY51_00535
Enzymes [BR:
rhob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HTY51_00535
DNA repair and recombination proteins [BR:
rhob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HTY51_00535
Prokaryotic type
HTY51_00535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKO20478
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All DBs
Position
complement(121843..123327)
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AA seq
494 aa
AA seq
DB search
MQKPLDSGLVWFRRDLRVDDHPALHLALQQCQRVYCAFIFDRDILDPLPRSDRRVAFIRA
SLVELDTDLRALAGQDNAGLIVHHGHATEALPALAQALGVQAVYAAHDYEPQAQGRDAQV
RGTLASLGIALHTCKDHVIFEGREVLTGGGTPYTVFTPYKKAWLARLAATQLPVFDCAPL
AAGLAPRPESLCHAVPTLAELGFEPSNLTQLRIPTGSSGARQLFADFFERMDQYQDTRDF
PALKGPSYLGVHLRFGTVSLRRLVNAAQQRSQQGSAGAATWLSELVWRDFYFQILANFPH
VAAQAFRPAYDAIQWEQGAHGQALYAAWCEGRTGYPIVDAAMAQLNQSGYMHNRLRMVAG
SFLVKDLGIHWQWGERYFAEKLNDFELASNNGGWQWVASSGCDAQPWFRIFNPISQSKKF
DPQGRFIRRYLPQLAALPDAALHAPWLAGPVELAAAGVTLGSGYPLPLVAHDEARAQTLA
RYAVVRKSGEKEEG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacccctggattccggtctggtctggttccggcgcgacctgcgggtcgacgac
catccggccctgcacctggccctgcaacagtgccagcgcgtctattgcgccttcattttc
gaccgggacatcctggatccgctgccacgcagcgaccgccgcgtggcgttcatccgcgcc
tccctggtggaactggatacggacttgcgcgcgctggccggccaggataatgccggcctg
atcgtgcaccatggccacgccaccgaagccctgcccgccctggcgcaggcactgggggtg
caggccgtgtacgccgcacacgattacgagccgcaggcccaggggcgggatgcccaggtg
cgtggcacgctggccagcctgggcatcgccctgcacacctgcaaggaccacgtgatcttc
gagggccgcgaagtcctcactggcggcggcacgccctacaccgtcttcacgccttacaag
aaggcctggctggcgcggctggctgccacgcagctgccggtgttcgactgcgccccgctg
gccgctggcctggccccgcggcccgagtccctgtgccatgccgtgccgaccctggccgaa
ctcggcttcgaacccagcaacctgacccagctcaggatacccaccggcagcagtggcgcg
cgccagctgtttgcggattttttcgagcgcatggaccagtaccaggacacccgcgatttc
ccggccctcaagggcccgagttaccttggcgtgcacctgcgttttggcacggtgtccctg
cgtcgtctcgtgaacgcggcacagcagcgcagccagcaaggcagtgccggcgctgcgacc
tggctcagcgagctggtctggcgcgatttctacttccagatcctggccaatttcccgcac
gtggcggcgcaggccttcaggccggcctatgacgcgatccaatgggaacagggcgcccat
ggccaggccctctacgccgcctggtgcgagggccgcacggggtatcccatcgtcgacgcg
gccatggcgcagctcaaccagagcggctacatgcacaaccgcctgcgcatggtggcgggc
agcttcctggtgaaagacctgggcatccactggcaatggggcgagcgctactttgccgaa
aaattgaacgacttcgagctggcgtccaacaacggtggctggcagtgggtggcctccagt
ggctgtgatgcgcaaccctggttccggatcttcaacccgatcagccagagcaagaagttc
gacccgcagggccgtttcatccgccgttacctgccgcagctcgcggccctgcccgatgcc
gcgctgcacgcaccctggctggctggcccggtcgagctggccgccgccggcgtgaccctg
ggcagcggctaccccctgcccctggtcgcccacgacgaggcgcgcgcgcagacgctggcg
cgctacgccgtggtgcgcaaaagcggggagaaggaagaaggctga
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