Rhodoferax sp. BAB1: HTY51_01685
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Entry
HTY51_01685 CDS
T08955
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rhob
Rhodoferax sp. BAB1
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhob03021
]
HTY51_01685 (rpoH)
Transcription machinery [BR:
rhob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HTY51_01685 (rpoH)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QKO20686
UniProt:
A0A6N0BJW3
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Position
complement(333127..334068)
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AA seq
313 aa
AA seq
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MTTVTGVSASALTVANPWALVPPLGNLDAYISAANRLPMLTLEEEQEFARKFRESNDLEA
AGKLVLSHLRLVVSVSRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYALHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSKKQGYKADAAAADAGTHRETLSESEIDL
MARELNVKREEVIEMETRLSGGDVMLDPGPSDDGEDSFGPIAYLADASHEPTAMIEARQR
DLLASDGIATALDALDARSRRIVEERWLKVNDDSSGGMTLHELAAEYGVSAERIRQIEVA
AMKKMKAALAEYA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgtcactggagtttccgcttccgcgctgaccgtcgcgaatccttgggcgctg
gtgcccccgctgggcaatctcgacgcctatatttcggccgccaaccgcctgcccatgctc
accctggaggaagagcaggagttcgcacgaaaattccgcgagtccaacgatcttgaggcc
gccggtaagttggtgctctctcacttgcgcctggtggtgtccgtttcccgccagtacctg
ggctacggcctgccccacggcgacctgatccaggaaggcaatgtgggcctgatgaaggcc
gtcaagcgcttcgacccggaccagggcgtgcgcctggtgagctacgcgctgcactggatc
aaggccgagatccatgaatacatcctgaagaactggcgcatggtcaaggtcgccacgacc
aaggcccagcgcaagctcttcttcaacctgcgctccaagaagcagggttacaaggccgac
gctgcagcggcggatgccggcacccaccgcgagacgctgagcgaaagcgagatcgacctg
atggcgcgcgagctcaatgtgaagcgcgaagaggtcatcgagatggaaacccgcctgtcg
ggcggtgatgtcatgctggacccgggcccttcggatgacggcgaggacagcttcggcccg
atcgcctacctggccgacgccagccacgagcccacggccatgatcgaagcgcgccagcgc
gacctgctggccagcgacggcattgccacggcgctggacgcgctggacgcacgcagccgc
cgcatcgtggaggagcgctggctcaaggtcaacgacgacagctcgggcggcatgacgctg
catgagctggccgccgaatacggcgtgagtgccgagcgcatccgccagatcgaagtggcc
gccatgaaaaagatgaaggcggcgctggcagaatacgcctga
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