Rhodoferax sp. BAB1: HTY51_02535
Help
Entry
HTY51_02535 CDS
T08955
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HTY51_02535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhob03019
]
HTY51_02535
Enzymes [BR:
rhob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HTY51_02535
Messenger RNA biogenesis [BR:
rhob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HTY51_02535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
UTP25
Motif
Other DBs
NCBI-ProteinID:
QKO20834
UniProt:
A0A6N0BLZ1
LinkDB
All DBs
Position
complement(513427..515085)
Genome browser
AA seq
552 aa
AA seq
DB search
MNFEDLKLAPAILKAVREQGYETPTAIQAQAIPLVLEGHDLLGGAQTGTGKTAAFTLPLL
HRLTMSRSAQNKWGGTGIRALVLTPTRELAAQVEESVQTYGKYLQLSSTVVFGGVGMNPQ
ISRLKKGVDILVATPGRLLDLQQQGFLDLSTVQTLVLDEADRMLDMGFIHDVKKVLALVP
KEKQSLLFSATFSDEIRELANGLLKNPQSVQVTPRNTTVQRITQVIHPVGRGKKKALLAH
IIKEHDWSQVLVFVRTKFGANNVAEYLEKNGITAMALHGNKSQGARTQALAGFKSGDVRA
LVATDIAARGIDIDDLPHVVNYEIPNVSEDYVHRIGRTGRAGADGAAVNLVCLDEEGFMA
DIERFTKQKIEVQVVEGFGPEPGERAEPIAMGRQTIWGGAGKPPSREVMAAAAKAARSEM
MQRMRDNKAGQGERSKGGGQGQGQRSGGGQNQPRGGQSKPQGQRAQGQGQGQGQGRNNEQ
RRSNNGPRAQGQGGGNGGQPDPLRTGTDALSQGGRRRGGAGGGRGRSGGGQGSGGGGGGV
DPLRTNYGRISH
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaagatctgaaactggctccggccatcctgaaggccgtgcgcgagcagggc
tacgagacccccacggccatccaggcccaggcgattccgctggtgctcgagggccacgac
ctgctgggcggcgcccagaccggtaccggcaagaccgccgccttcaccctgcccctgctg
caccgcctcaccatgagccgcagcgcccagaacaaatggggcggcaccggcatccgtgcc
ctggtgctcacccccacgcgcgagctggccgcccaggtcgaggaatcggtgcagacctac
ggcaagtacctgcagctgagctccaccgtggtcttcggcggtgtcggcatgaacccgcag
atcagccgcctgaaaaagggcgtggacatcctggtcgccaccccgggccgcctgctagac
ctgcagcagcagggtttcctggacctgtccacggtgcagaccctggtgctggacgaagcc
gaccgcatgctggacatgggcttcatccacgacgtcaagaaggtgctggccctggtgccc
aaggaaaagcagagcctgctgttctccgccaccttcagcgacgagatccgtgagctggcc
aacggcctgctcaagaaccctcagagcgtgcaggtcacgccgcgcaacaccacggtgcag
cgcatcacccaggtcatccacccggtgggccgtggcaagaagaaggccctgctggcgcac
atcatcaaggaacacgactggagccaggtgctggtcttcgtgcgcaccaagttcggcgcc
aacaacgtggccgagtacctggagaagaacggcatcaccgccatggccctgcacggcaac
aagagccagggtgcccgcacccaggcgttggccggcttcaagagcggcgacgtccgcgcc
ctggtggccaccgacatcgccgcgcgcggcatcgacatcgacgatctgccgcacgtggtg
aactacgagatccccaacgtcagcgaagactatgtgcaccgcatcggccgcaccggccgc
gccggcgccgacggcgccgctgtcaacctggtgtgcctggacgaggaaggcttcatggcc
gacatcgagcgcttcaccaagcagaagatcgaggtgcaggtggtcgaaggcttcggtccc
gagccgggcgagcgtgccgagcccatcgccatgggtcgccagaccatctggggcggcgcc
ggcaagccgccgagccgcgaagtcatggccgcagccgccaaggctgcgcgctccgagatg
atgcagcgcatgcgcgacaacaaggccggccagggcgaacgcagcaagggcggcggccag
ggtcagggccagcgcagcggcggcggacagaaccagccgcgtggcggccagtccaaaccc
cagggtcagcgtgcccagggccagggacaaggtcagggccagggtcgcaacaacgagcag
cgccgcagcaacaacggcccgcgtgctcagggtcagggcggtggcaacggcggtcagccc
gatccgctacgcaccggtaccgatgccctgagccagggcggtcgccgtcgcgggggcgca
ggcggtggacgcggccgttccggcggtggccagggtagcggtggcggtggcggcggagtc
gatccgctgcgtaccaactacggccgcatcagccactga
DBGET
integrated database retrieval system
