Rhodoferax sp. BAB1: HTY51_03730
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Entry
HTY51_03730 CDS
T08955
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HTY51_03730 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhob03019
]
HTY51_03730 (orn)
03009 Ribosome biogenesis [BR:
rhob03009
]
HTY51_03730 (orn)
Messenger RNA biogenesis [BR:
rhob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HTY51_03730 (orn)
Ribosome biogenesis [BR:
rhob03009
]
Eukaryotic type
Pre-60S particles
RNases
HTY51_03730 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
QKO21052
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All DBs
Position
754994..755563
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AA seq
189 aa
AA seq
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MSDNVTPLGKSDLNLVWLDCEMTGLDPEKERLIEIAVIVTGPNLEPRIEGPVLVIHQGDE
ILGKMDAWNKGTHGRSGLIDKVKASTMTEAEAEALLIAFLAKYVPKGVSPMCGNSIGQDR
RFLVKYMPKLEAFFHYRNVDVSTFKELARRWRPEVYSGFKKAQKHTALADVHESIDELLH
YREHFLKLA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgtgaccccacttggcaaatccgatctcaacctggtctggctcgattgc
gagatgaccggcctggaccctgaaaaagaacgcctgattgaaatcgccgtcatcgtgacc
ggcccgaacctggaaccccgtatcgaaggcccggtgctggtgatccaccagggcgacgag
atcctgggcaagatggacgcctggaacaagggcacccacggccgcagcggcctgatcgac
aaggtcaaggcctcgaccatgaccgaagccgaggccgaagccttgctgatcgccttcctg
gccaagtacgtacccaagggcgtttcgcccatgtgcggcaacagcatcggccaggaccgg
cgtttcctggtcaagtacatgcccaagctggaagccttttttcactaccgcaatgtggac
gtgagcaccttcaaggagctggcgcgccgctggcggcccgaggtctacagcggcttcaag
aaggcgcagaaacacacggccctggccgatgtgcacgagtccatcgacgaactgctgcac
taccgcgagcacttcctcaagctggcctga
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