Rhodoferax sp. BAB1: HTY51_03995
Help
Entry
HTY51_03995 CDS
T08955
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob03420
Nucleotide excision repair
rhob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HTY51_03995
03430 Mismatch repair
HTY51_03995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhob03400
]
HTY51_03995
Enzymes [BR:
rhob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HTY51_03995
DNA repair and recombination proteins [BR:
rhob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HTY51_03995
MMR (mismatch excision repair)
Other MMR factors
HTY51_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
SpoIIAA-like
Motif
Other DBs
NCBI-ProteinID:
QKO21098
UniProt:
A0A6N0BQ56
LinkDB
All DBs
Position
814539..816935
Genome browser
AA seq
798 aa
AA seq
DB search
MSSVLPPSGSTSSLFPAPTESPLLASLNPEQRAAVALPPEPALILAGAGSGKTRVLTTRI
AWLLQTGQVSPGGLLAVTFTNKAAREMMTRLQSMLPVNVRGMWIGTFHGLCNRLLRAHHR
TVGLPATFQILDTQDQLSAIKRLCKQFNVDEERFPPKQLAWFIGGCKEDGLRPNMVEASD
PDTRKKVEIYQLYEDQCQREGVVDFGELLLRSYELLRDHDAVREHYQRRFRHILIDEFQD
TNKLQYAWIKLLAGFSPAGTLREDGGAGAVLAVGDDDQSIYAFRGARVGNMADFVREFHV
QHQIKLEQNYRSHSNILDTANALISHNKHRLGKNLRTDQGAGEPVRVYEAVSDFAEAQWM
IDEMKQLVREGTNRKEIAVLYRSNAQSRVIETALFNAGLPYRVYGGLRFFERAEIKHALA
YLRLLENPNDDTSFMRVVNFPPRGIGARSIEQLQDAARSAGCSLHDAVSALPGKAGANLG
AFVAKIDVLREQTQGLTLREIIELVLQHSGLVEHYQAEREGADRIENLEELVTAAESFVS
IEGFGREAEAMKAAGETTALVPAEPGAPDESGEVLSPLAAFLTHAALEAGDNQAQEGQEA
VQLMTVHASKGLEFDVVFITGMEEGLFPHENSMSDFDGLEEERRLMYVAITRARNRLYLS
HSQTRMLHGQTRYHIRSRFFDELPEETLKWITPKNQGFGSGFAPPASGYNRQREGWSEGW
KGGNYNRDTGSSPAPVPSKAQEASTGLKLGMRVFHNKFGEGTVLTLEGSGDDARAQINFP
RHGTKWLALSVAKLTPVT
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgtcctgccgccttccggttctacgtcttccctgttccccgcgcccaccgag
tcgccgctgctggccagcctgaaccccgagcagcgggccgccgtggccctgccgcccgag
cccgcgctgatcctggccggggccggttccggcaagacccgtgtgctcaccacgcgcatc
gcctggctgctgcagacgggccaggtctcgcccggcggcctgctggccgtgacctttacc
aacaaggcggcgcgcgagatgatgacgcgcctgcagtccatgctgccggtcaacgtgcgc
ggcatgtggatcggcaccttccacggcctgtgcaaccgtctgctgcgcgcgcaccaccgc
acagtgggcctgccggccacgttccagatcctggacacgcaggaccagctcagcgccatc
aagcgcctgtgcaagcagttcaacgtggacgaggagcgtttccccccgaagcagctggcc
tggttcatcggcggctgcaaggaagacggcctgcgcccgaacatggtagaggccagcgac
cccgacacgcgcaagaaggtcgagatataccagctctatgaagaccagtgccagcgcgaa
ggcgtggtggacttcggtgaactgctgctgcgcagctacgagctgctgcgcgaccacgac
gccgtgcgcgagcactaccagcggcgcttccgccacatcctgatcgacgagttccaggac
accaacaagctgcagtacgcctggatcaagctgctggcgggcttcagcccggccggcacg
ctgcgtgaggacggcggcgccggcgccgtgctggccgtgggcgacgacgaccagagcatc
tacgcctttcgcggcgcgcgcgtgggcaatatggccgacttcgtgcgcgagttccatgtg
cagcaccagatcaagctggagcagaactaccgcagccacagcaacatcctggacacggcc
aacgccctgatcagccacaacaagcaccgcctgggcaagaacctgcgcaccgaccagggc
gcgggcgaacccgtgcgcgtctacgaggcggtgagcgacttcgccgaggcgcagtggatg
atcgacgagatgaaacagctcgtccgcgaagggacgaaccgcaaggagatcgccgtgctc
taccgcagcaatgcgcagagccgggtgatcgagaccgcgctgttcaacgccggcctgccc
taccgtgtgtatggcggtctgcgcttcttcgaacgcgccgagatcaagcacgccctggcc
tacttgcgcctgctggagaacccgaacgacgacaccagcttcatgcgggtggtgaacttc
ccgccgcgcggcatcggcgcgcgctccatcgagcagctgcaggacgccgcccgcagcgcc
ggctgttccctgcacgatgcggtgagcgccctgccgggcaaggccggcgccaatctgggc
gccttcgtggccaagatcgacgtgctgcgcgagcagacccagggcctgaccctgcgcgag
atcatcgaactcgtgctgcagcacagcggcctggtcgagcattaccaggccgaacgcgaa
ggcgccgaccgcatcgagaacctggaagaactggtcaccgcggccgagagttttgtgagc
atcgaaggctttggccgcgaggccgaggccatgaaggccgccggggagaccaccgcgctg
gtgccggccgaacccggcgccccggacgagagcggcgaagtgttgtcgccgctcgccgcc
ttcctcacccacgctgctctggaggctggtgacaatcaggcgcaagaggggcaggaagcc
gtgcaactgatgactgtgcacgccagcaagggcctggagttcgacgtggttttcatcacg
ggcatggaagagggcctgttcccgcatgagaactccatgagcgacttcgacggcctggag
gaggagcgtcgcctcatgtacgtggccatcacccgcgcgcgcaatcgtctctacctgagc
cactctcagacgcgcatgctgcacggtcagacccgttaccacatccgcagccgcttcttt
gacgagctgcccgaggaaacgctgaagtggatcaccccgaagaaccagggtttcggcagc
ggcttcgcgccgccggcctcaggctacaaccgccagcgtgaaggctggagcgagggctgg
aagggcggcaactacaaccgcgacacgggcagcagcccggccccggtgccgtccaaggcg
caggaagcgtccaccggcctgaagcttggcatgcgggtcttccacaacaagttcggagag
ggcacggtgctgacactggaaggcagcggggacgatgcgcgcgcgcagatcaacttcccg
cgccacggcaccaagtggctggcactgtcagtggcgaagctcacgccggtgacttga
DBGET
integrated database retrieval system
