Rhodoferax sp. BAB1: HTY51_04030
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Entry
HTY51_04030 CDS
T08955
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob03030
DNA replication
rhob03410
Base excision repair
rhob03420
Nucleotide excision repair
rhob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTY51_04030 (polA)
03410 Base excision repair
HTY51_04030 (polA)
03420 Nucleotide excision repair
HTY51_04030 (polA)
03440 Homologous recombination
HTY51_04030 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhob03032
]
HTY51_04030 (polA)
03400 DNA repair and recombination proteins [BR:
rhob03400
]
HTY51_04030 (polA)
Enzymes [BR:
rhob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HTY51_04030 (polA)
DNA replication proteins [BR:
rhob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HTY51_04030 (polA)
DNA repair and recombination proteins [BR:
rhob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HTY51_04030 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HTY51_04030 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QKO21105
UniProt:
A0A6N0BMC9
LinkDB
All DBs
Position
821432..824215
Genome browser
AA seq
927 aa
AA seq
DB search
MSDKKTLLLVDGSSYLYRAFHAMPDLRAVPGDPTSPPTGAIRGMINMLQSLRKEVPADYA
VCVFDAKGPTFRDEIYPEYKAQRSPMPDELRAQIEPIHEVVRLMGWKVLDVPGVEADDVI
GTLAVAGASHEVEVIISSGDKDLAQLVTPHITIVDTMNGKRRDVAGVEAEFGVPPRLMVD
FQTLVGDAVDNVPGVQKVGPKTAAKWLQEYGSLDNIVANADAIKGAAGENLKKALDWLPT
GRQLLTIKTDCDLNGWVPGLPALDAVAVGEPDTAALKDFYEKYGFKGLARSLGGETAPVP
AAKTTAADDSNPGLFDEPAAPVAPRVSQLKYDTILDWDSFERWLQKVQAAELVAVDTETT
SLDEMVAEVVGISFSVVPGEAAYIPLRHDYPDAPAQLPRDEVLAKLKPWLENPAHKKLGQ
HVKYDRHVLANHGIEVRGYAHDTMLQSYVLEVHKPHGLASLAERHLGRSGINFEDLCGKG
AKQIPFSQVAIDKAAEYSCEDSDQTLDVHRVLWPQLQADEKLKFIYELEMASSETLYRIE
RNGVLIDAPTLANQSHQLGQRILQLEQEAYELAGQPFNLGSPKQIGEIFFTKLGLPIVKK
TATGAPSTDEEVLEKLAEDFPLPAKILEHRGLSKLKGTYTDKLAQLAHPRTGRVHTHYAQ
AVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPPGCVIASADYSQIELRIMAHISGDA
ALLLAFHDGMDVHRATAAEVFGVPTSQVSSEQRRYAKVINFGLIYGMSAYGLAKSLGIDN
TAAKNYIERYFDRYPGVKRYMDETRQQAKARGYVETVFGRRLYLPEINSPNGPRRSGAER
AAINAPMQGTAADLIKLSMNKVQEVLDAEGRKTRMIMQVHDELVFEVPEAEVDWLRHEIP
KIMAGVAQLKVPLLAEVGVGPNWDKAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagaaaaccctgctgctggtcgatggttccagctacctgtaccgcgccttc
cacgccatgccggacctgcgcgccgtgccgggggacccgaccagcccgcccaccggcgcc
atccgcggcatgatcaacatgctgcagagcctgcgcaaggaagtgcccgccgactacgcg
gtctgcgtgttcgacgccaagggcccgaccttccgcgacgaaatctaccccgaatacaag
gcccagcgctcgcccatgcccgacgaactgcgcgcgcagatcgagcccatccacgaggtg
gtgcgcctgatgggctggaaggtgctggacgtgccgggtgtggaggccgacgacgtgatc
ggcaccctggccgtggccggcgcgagccacgaggtggaagtcatcatcagcagcggcgac
aaggacctggcccagctggtcacgccccacatcaccatcgtcgacaccatgaacggcaag
cgccgcgatgtggccggggtggaggccgagttcggcgtgccgccgcgcctgatggtcgat
ttccagaccctggtgggtgacgccgtggacaacgtacccggtgtgcagaaggtcggcccc
aagaccgctgccaagtggctgcaggaatacggctcgctggacaacatcgtggccaacgcc
gacgccatcaagggcgcggccggcgagaacctgaagaaggcgctggactggctgcccacc
ggccgccagctgctgaccatcaagaccgactgcgacctcaacggctgggtgcccggtcta
ccggcgctggacgccgtggccgtgggcgaacccgacacggcggcgctgaaagacttctac
gagaaatacggcttcaagggcctggcgcgttcgctcggaggcgagacagcgcccgtgccg
gcggccaagaccacggccgccgacgacagcaaccccggtttgttcgacgaaccggccgcg
ccggtggccccgcgcgtgagccagctcaagtacgacaccatcctcgactgggacagcttc
gagcgctggctgcagaaagtgcaggccgccgagctggtggccgtggacaccgagaccacc
tcgctggacgagatggtggccgaggtcgtgggcatttccttcagcgtggtgcccggcgag
gcggcctacatcccgctcaggcacgactaccccgacgcgcccgcgcagctgccgcgcgac
gaggtgctggcgaagttgaagccctggctggaaaaccccgcgcacaagaagctgggccag
cacgtcaagtacgaccgccatgtgctggccaaccacggcatcgaggtgcggggttacgcg
cacgacaccatgctgcagagttatgtgctggaagtgcacaagccgcatggcctggccagc
ctggccgaacgccacctggggcgcagcggcatcaattttgaggacctctgcggcaagggc
gccaagcagattcccttcagccaggttgcgatcgacaaggcagccgaatactcctgtgaa
gactcggaccagaccctggacgtgcaccgcgtgctgtggccgcagctgcaggccgacgag
aagctgaagttcatctacgaactggagatggccagttcggagacgctgtaccgcatcgaa
cgcaacggcgtgctgatcgacgcaccgacgctggccaaccagagccaccagctgggccag
cgcatcctgcagctcgaacaggaagcgtacgaactcgcggggcagcccttcaacctcggc
agcccgaagcagatcggcgagatcttcttcaccaagctgggcttgcccatcgtgaagaag
accgccaccggcgcgcccagcaccgacgaagaagtgctggagaaactggccgaagacttc
cccctgccggccaagatcctggagcaccgcggcctgtccaagctcaagggcacctacacc
gacaagctggcgcagctggcgcatccgcgcaccggccgtgtgcacacgcattacgcccag
gccgtggccgtgacggggcgtctgtccagcaacgaccccaatctgcagaacatccccatc
cgcacacccgagggccggcgcgtgcgcgaggcctttgtggccccgcccggttgtgtgatc
gccagcgccgactactcgcagatcgagctgcgcatcatggcccacatcagcggtgacgct
gcgctcctgctggccttccacgacggcatggacgtgcaccgcgccaccgcggccgaggtc
ttcggtgtgcccaccagccaggtcagcagcgaacagcgccgttacgccaaggtcatcaac
ttcggcctgatctacggcatgagcgcctacggcctggccaagagcctgggcatcgacaac
accgcggccaagaactacatcgagcgctacttcgaccgctaccccggcgtgaagcgctac
atggacgagacgcgtcagcaggccaaggcgcgtggttatgtggaaaccgtcttcggccgc
cgcctctacctgcccgagatcaactcccccaacggcccgcgccgcagcggcgccgaacgc
gccgccatcaacgcgcccatgcagggcacggcagccgacctcatcaagctcagcatgaac
aaggtgcaggaagtgctcgacgccgaaggtcgcaagaccaggatgatcatgcaggtgcac
gacgaactggtcttcgaagtgcccgaggccgaggtggactggctgcgccacgagatcccg
aagatcatggccggcgtggcccagctcaaggtgccgctgctggccgaggtgggggtgggg
ccgaactgggacaaggcgcactga
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