Rhodoferax sp. BAB1: HTY51_04060
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Entry
HTY51_04060 CDS
T08955
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rhob
Rhodoferax sp. BAB1
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhob03009
]
HTY51_04060 (dbpA)
Enzymes [BR:
rhob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HTY51_04060 (dbpA)
Ribosome biogenesis [BR:
rhob03009
]
Prokaryotic type
rRNA helicases
HTY51_04060 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
P-loop_SecA
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QKO21110
UniProt:
A0A6N0BLZ4
LinkDB
All DBs
Position
complement(828896..830287)
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AA seq
463 aa
AA seq
DB search
MSTPTAFSTLPLSPAMLENLQQLGYSAMTPIQATSLPIALLGKDLIAQAQTGSGKTAAFA
LVLLANLNPRRFAVQSLVLCPTRELADQVTVELRRLARAQDNIKIVTLCGGVPLRMQSAS
LEHGAHIVVGTPGRIMDHLQRGTLDLAALNTLVLDEADRMLDMGFFDDITTVAKQCPKER
QTLLFSATYPEGIDKIAKQFLRDPQQVKVETKQSAPKIEQRFYEVTRANRLQAVAQLLLH
FRPVSTLAFCNTKQRCKELVTLLQAQGISALALYGELEQRERDQVLAQFANRSCSVLVAT
DVASRGLDITQLEAVINVDISPDPEVHVHRIGRTGRAGESGLALSLASMDEMGAVGKIEQ
YQTQESVWHKLDELKPASQEPLLPPMTTLQILGGRKEKIRPGDVLGALTGEAGYTREQIG
KINVTEFCTFVAVERSIASEAVARLNAGKVKGKSVKARLVGED
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcccaccgccttcagcaccctgcccctgagccccgccatgctggagaacctc
cagcagctgggttacagcgcgatgacaccgatccaggcgaccagcctgcccatcgccctg
ctgggcaaggacctgatcgcccaggcccagaccggcagcggcaagaccgccgccttcgcc
ctggtgctgctggccaacctgaacccccgccgttttgccgtgcagtccctggtgctctgc
cccacccgcgaactggccgaccaggtgaccgtcgaactgcgccgcctggcgcgtgcgcag
gacaacatcaagatcgtcaccctctgtggtggcgtgcccctgcgcatgcagagcgccagc
ctggaacacggcgcccacatcgtggtgggcacaccggggcgcatcatggaccacctgcag
cgcggcaccctggacctggccgcactcaacaccctggtgctggacgaggccgaccgcatg
ctggacatgggtttcttcgacgacatcaccaccgtggccaaacagtgcccgaaggaacgg
cagaccctgctgttctcggccacctaccccgaaggcatagacaagatcgccaaacaattc
ctgcgcgatccgcagcaggtcaaggtggaaaccaagcagagcgcaccgaagatcgagcag
cgtttctacgaggtcacgcgtgcgaatcgcctgcaggccgtggcccagctgctgctgcac
ttccgcccggtcagcaccctggccttctgcaacaccaaacaacgctgcaaggaactggtg
accctgctgcaggcccagggcatcagcgcgctggccctgtacggcgaactggagcagcgc
gaacgcgaccaggtgctggcgcaatttgccaaccgcagctgctcggtgctggtggccacc
gacgtggcctcgcgcgggctggacatcacgcagctcgaagccgtgatcaacgtggacatc
tcgcccgaccccgaggtgcatgtgcaccgcatcggccgcaccggccgcgccggcgagtcc
ggcctggccctgagcctggccagcatggacgagatgggagcggtgggaaagatcgagcag
taccagacgcaggaatcggtctggcacaagctggacgaactgaaaccggccagccaggag
ccgctgctgccgcccatgacgacactgcagatcctcggtggccgcaaggaaaagatccgc
cccggcgacgtgctgggcgcgctcaccggcgaggccggctacacccgcgagcagatcggc
aagatcaacgtcaccgagttctgcaccttcgtggccgtggagcgcagcattgccagcgag
gccgtggcccgcctgaatgcgggcaaggtcaagggcaagagcgtgaaggccaggctggtc
ggcgaggattga
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