KEGG   Rhodoferax sp. BAB1: HTY51_06780
Entry
HTY51_06780       CDS       T08955                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhob  Rhodoferax sp. BAB1
Pathway
rhob00010  Glycolysis / Gluconeogenesis
rhob00020  Citrate cycle (TCA cycle)
rhob00260  Glycine, serine and threonine metabolism
rhob00280  Valine, leucine and isoleucine degradation
rhob00310  Lysine degradation
rhob00380  Tryptophan metabolism
rhob00620  Pyruvate metabolism
rhob00630  Glyoxylate and dicarboxylate metabolism
rhob00640  Propanoate metabolism
rhob00670  One carbon pool by folate
rhob00785  Lipoic acid metabolism
rhob01100  Metabolic pathways
rhob01110  Biosynthesis of secondary metabolites
rhob01120  Microbial metabolism in diverse environments
rhob01200  Carbon metabolism
rhob01210  2-Oxocarboxylic acid metabolism
rhob01240  Biosynthesis of cofactors
Module
rhob_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhob_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhob_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:rhob00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HTY51_06780 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HTY51_06780 (lpdA)
   00620 Pyruvate metabolism
    HTY51_06780 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HTY51_06780 (lpdA)
   00640 Propanoate metabolism
    HTY51_06780 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HTY51_06780 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HTY51_06780 (lpdA)
   00310 Lysine degradation
    HTY51_06780 (lpdA)
   00380 Tryptophan metabolism
    HTY51_06780 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HTY51_06780 (lpdA)
   00670 One carbon pool by folate
    HTY51_06780 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhob04147]
    HTY51_06780 (lpdA)
Enzymes [BR:rhob01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HTY51_06780 (lpdA)
Exosome [BR:rhob04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HTY51_06780 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA FAD_binding_2 Thi4 AlaDh_PNT_C Biotin_lipoyl_2 NAD_binding_8 FAD_binding_3 HI0933_like DAO GCV_H HlyD_D23 Lycopene_cycl
Other DBs
NCBI-ProteinID: QKO21611
UniProt: A0A6N0BNI0
LinkDB
Position
1399498..1401306
AA seq 602 aa
MALVEIKVPDIGDFESVAVIELLVKPGDTIKAEQSLITVESDKASMEIPASQGGVVKELK
VKIGDKVKEGSVVLLLESSATAAPAPAAATPAVAAPAAPKVAAPAPAAASFGGSADLDCD
VLVLGGGPGGYSAAFRAADLGLKVVLVERYAALGGVCLNVGCIPSKALLHVAAVMDEVSH
LGDLGVDFGKPVVNIDKLRGHKEKVIGKLTGGLAAMAKMRKVTVVRGYGAFVGPKHVEVE
ETTGSAQDKTGKKQVVAFKKAIIAAGSQAVRLPFMPDDPRVVDSTGALALKEVPKRMLIL
GGGIIGLEMGTVYSTLGARLDVVEMMDGLMQGADRDLVKVWQKMNAPRFDNIMLKTKTVG
AKATPKGIEVTFESAEPGGAVPPPQTYDLVLQAVGRTPNGKKIAADKAGVSVTDRGFINV
DIQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGELQGNKELASAAFNARVIPS
VAYTDPEVAWVGLTEDQAKAQGLKVKKGLFPWTASGRAIANGRDEGFTKLLFDEETHRIV
GGGIVGTHAGDMIGEIALAIEMGADAVDIGKTIHPHPTLGESIGMAAEVAHGSCTDVPPA
RR
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggcattggtagaaatcaaggtcccggacatcggcgacttcgaatcggtcgcagtgatc
gagctgctggtcaagcccggcgacaccatcaaggccgagcagagcctgatcactgtggag
agcgacaaggcctccatggaaatcccggccagccagggtggggtggtcaaggaactcaag
gtcaagatcggtgacaaagttaaagaaggtagcgtcgtgctgctactcgagtcatctgca
actgcagcaccggctcccgccgcggctacgcctgccgttgcagctcccgccgcacccaag
gtcgcggcgccagctccggctgctgcgagcttcggcggcagcgccgacctcgactgcgat
gtgctcgtgctcggcggtggccccggcggttattcggccgccttccgcgcggccgacctc
ggcctcaaggtcgtgctggtcgagcgttatgccgcgctgggcggcgtctgtctgaacgtc
ggctgcattccgtccaaggccctgctgcacgtagccgccgtgatggacgaggtcagccac
ctgggtgacctgggggtggacttcggtaagccggtggtgaacatcgacaagctgcgcggc
cacaaggaaaaggtgatcggcaagctgaccggcggcctggccgccatggccaagatgcgc
aaggtcacggtcgtgcgcggttacggtgctttcgtcggccccaagcacgtggaagtggaa
gagaccacgggtagcgcgcaagacaagaccggcaagaagcaggtcgtggctttcaagaag
gccatcatcgctgcgggcagccaggccgtgcgcctgcccttcatgcccgacgatccgcgt
gtggtggacagcaccggtgcgctggcgctcaaggaagtgcccaagcgcatgctcatcctg
ggcggcggcatcatcggcctggaaatgggcacggtctacagcaccctgggcgcacgcctg
gacgtggtggaaatgatggacggcctgatgcagggcgccgaccgtgacctggtcaaggtc
tggcagaagatgaacgccccgcgttttgacaacatcatgctcaagaccaagaccgtgggc
gccaaggccacgcccaagggcatcgaggtgacgttcgaaagtgccgagccgggtggggcg
gtcccgccaccgcagacttacgacctggtgctgcaggccgtgggccgcacccccaacggc
aagaagatcgccgccgacaaggccggtgtcagcgtgaccgaccgcggtttcatcaacgtc
gacatccagatgcgcaccaacgtgccgcacatcttcgccattggcgacatcgtgggccag
cccatgctggcgcacaaggcggtgcacgaggcgcatgtggcggccgaagtgatcgccggt
gaactgcagggcaacaaggaactggcttctgccgccttcaacgcccgcgtgattcccagc
gtggcctataccgacccggaagtggcctgggtgggcctgaccgaagaccaagccaaggcc
caagggctgaaggtcaagaagggcctgttcccctggacggcttcgggccgcgccattgcc
aatggccgtgacgaggggttcaccaagctgctgttcgacgaagagacgcatcgcatcgtc
ggcggtggcatcgtgggcacgcatgcgggcgacatgattggcgagatcgcactggccatt
gagatgggcgccgacgccgtggacatcggcaagaccatccacccgcatcccacgctgggc
gaaagcatcggcatggccgcggaagtggcgcatggcagctgcacggacgtaccgccggca
cgacgctga

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