Rhodoferax sp. BAB1: HTY51_08240
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Entry
HTY51_08240 CDS
T08955
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob00300
Lysine biosynthesis
rhob01100
Metabolic pathways
rhob01120
Microbial metabolism in diverse environments
rhob01230
Biosynthesis of amino acids
Module
rhob_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HTY51_08240 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhob01002
]
HTY51_08240 (dapE)
Enzymes [BR:
rhob01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HTY51_08240 (dapE)
Peptidases and inhibitors [BR:
rhob01002
]
Metallo peptidases
Family M20
HTY51_08240 (dapE)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QKO21883
UniProt:
A0A6N0BQT8
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All DBs
Position
1733534..1734679
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AA seq
381 aa
AA seq
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MSRTLQLTEQLIARASVTPDDAGCQALLAERLQPLGFACETITSGPADFRVSNLWAKRVA
QAGAPLLVFAGHTDVVPTGPVAQWSQDPFTPTHRDGKLYGRGASDMKTSIAAFVVAVEEF
VAAQPQAPLNIALLLTSDEEGPAVDGTVKVCEALQARGEKLDYCIVGEPTSLQRTGDMIK
NGRRGTMSGKLTVKGVQGHIAYPHLARNPIHLFAPALTELTAIEWDRGNDFFPPTTWQVS
NIHGGTGASNIIPGNVVVDFNFRFCTESTPQSLQQRLTTVLNKHELEYDITWTIGGLPFL
TTPGTLVNAVREAIRAEAGIETELSTSGGTSDGRFIAQVCPQVIELGPTNATIHKIDEYV
PLADIEPLKNIYRRVLEKLAL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtaccctgcaactgaccgagcaactgatcgcgcgcgcctccgtcacccccgac
gacgccggctgccaggccctgctggccgagcgcctccagccgctgggttttgcctgtgaa
accatcaccagcggcccggccgatttccgcgtcagcaacctgtgggccaaacgcgtagcc
caggccggcgccccgctgctggtctttgccggccacaccgacgtggtgcccaccggcccg
gtggcccagtggagccaggaccccttcacgcccacacaccgcgacggcaagctctatggc
cgcggcgccagtgacatgaaaacctcgatcgccgcctttgtggtggcggtggaggagttt
gtcgccgcgcaaccccaggcaccgctgaacattgccctgctgctgaccagcgacgaggaa
ggcccggccgtggacggcaccgtcaaggtctgcgaggccctgcaggcgcgcggcgaaaag
ctggactactgcatcgtcggcgaacccacctcgctgcagcgcaccggcgacatgatcaag
aacggccggcgcggcaccatgagcggcaagctcacggtcaagggcgtgcagggccatatc
gcctacccgcacctggcccgcaaccccatccacctgttcgcgcccgcgctgaccgaactg
acggccatcgaatgggacagaggcaacgacttcttcccgcccacgacctggcaggtcagc
aacatccatggtggcaccggcgccagcaacatcattcccggcaacgtcgtggtggacttc
aacttccgcttctgcaccgagtccacgccgcaaagcctgcagcagcgactcaccaccgta
ctgaacaagcacgagctggaatacgacatcacgtggaccatcggcggcctgcccttcctc
acgacaccgggcaccttggtcaacgcggtgcgcgaggccatccgcgccgaagccggcatc
gagaccgagctttccaccagcggcggcaccagtgacggtcgtttcatcgcccaagtctgc
ccacaggtcatcgagctcggccccaccaacgccaccatccacaagatcgacgagtatgtt
ccgctggccgacatcgagccgctgaagaacatctaccggcgcgtgctggaaaagctcgcg
ctatga
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