KEGG   Rhodoferax sp. BAB1: HTY51_09315
Entry
HTY51_09315       CDS       T08955                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
rhob  Rhodoferax sp. BAB1
Pathway
rhob03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rhob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HTY51_09315 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhob03400]
    HTY51_09315 (sbcB)
Enzymes [BR:rhob01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     HTY51_09315 (sbcB)
DNA repair and recombination proteins [BR:rhob03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HTY51_09315 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HTY51_09315 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HTY51_09315 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: QKO22076
UniProt: A0A6N0BNT3
LinkDB
Position
complement(1943705..1945153)
AA seq 482 aa
MSPNHTFLWHDYETFGLSPRRDRPAQFAGIRTDAELNEVGEPVMIYCQPANDYLPDPASC
LITGITPQQCLARGLPEHAFAAQIEQLLAQPGTIGVGYNTIRFDDEVTRFMLWRNLMDPY
AREWQNDCGRWDLLDVVRMAYALRPQGIQWPLKEDGKPSFKLEDLARANGLLHESAHDAL
SDVRATIALARLIRAAQPKLFDFCLGLHKKDRVAAELGLPTSAQAAQPFLHVSGMFPPER
GCLAIMWPLATHPSNKNELLAWDLAHDPGELAELDVATLRLRLFSKTAELPEGVQRLPLK
SVHLNKSPMVVRNLKTLSDEMAARWGVDMDAALRNAERARDLPDMSAIWPQVYQRPEEAA
PDVDEDLYGGFVGNADRRRLNQLRALDPAELAQRRTGFDDHRLGELLFRYRARNFAETLS
AEEVQRWQAHRAARLLEGENGARSVDEFLAALDTCAQTADARGEQILADLSDYAQAITPE
PL
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgagcccgaatcacacttttctctggcacgactacgagaccttcggcctgagcccgcgc
cgtgaccggccggcgcagtttgccggcatccgcaccgatgccgagctgaacgaagtgggc
gagccggtgatgatctactgccagcccgccaacgactatctgcccgaccccgcctcgtgc
ctgatcaccggcattaccccccagcagtgcctggcgcgcggcctgcccgagcacgccttt
gctgcgcaaatcgagcagctgctggcccagccgggcaccatcggtgtgggctacaacacc
atccggttcgacgacgaggtcacgcgcttcatgctctggcgcaacctgatggacccctat
gcacgcgaatggcagaacgattgcggccgctgggacctgctcgacgtcgtacgcatggcc
tacgcgctgcggccccagggcatccagtggcctttgaaagaagacggcaagcccagcttc
aagctcgaagacctggcgcgcgccaatggcctgctgcacgagtccgcgcacgatgccttg
tcggacgtgcgcgccaccatcgccctggcgcggctgatacgcgccgcgcagcccaagctg
ttcgatttctgcctgggcctgcacaagaaggaccgggtggcggccgagctgggtctgccc
accagcgcgcaggcggcccagcccttcttgcatgtgtcgggcatgttcccgcccgaacgc
ggctgcctcgccatcatgtggccgctggcgacccacccgagcaacaagaacgaactgctg
gcctgggacctggcgcatgaccccggcgaactggccgagctcgacgtggcgacgctgcgc
ctgcggctgttcagcaagacagccgagctgcccgaaggcgtgcagcgcctgccgctcaag
tcggtgcacctcaacaaatcgcccatggtggtgcgcaatctgaaaaccctgagcgatgag
atggccgccaggtggggggtggacatggatgcggcgctgcgcaacgctgagcgcgcgcgc
gacctgcccgatatgagcgccatctggccgcaggtgtatcagcgccccgaggaagcggct
cccgacgtggacgaagacctctatggcggcttcgtcggcaatgcggatcggcggcggctg
aaccagctgcgcgcgctcgatcccgccgagctggcccagcgacgcaccggctttgacgac
caccggctcggcgaactgctgttccgctaccgtgcacgcaattttgccgagaccctgagc
gccgaagaggtgcagcgctggcaggcgcaccgggcggcgcgcctgctcgaaggcgagaac
ggcgcccgctcggtggatgagttcctggccgcgctggacacctgcgcgcagacggcggat
gcgcgcggcgagcagatcctggccgatttgtccgactacgcgcaggcgatcacgcctgag
cccctgtag

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