Rhodoferax sp. BAB1: HTY51_14560
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Entry
HTY51_14560 CDS
T08955
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob00061
Fatty acid biosynthesis
rhob00071
Fatty acid degradation
rhob01100
Metabolic pathways
rhob01212
Fatty acid metabolism
rhob02024
Quorum sensing
rhob04146
Peroxisome
Module
rhob_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HTY51_14560
00071 Fatty acid degradation
HTY51_14560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HTY51_14560
09145 Cellular community - prokaryotes
02024 Quorum sensing
HTY51_14560
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhob01004
]
HTY51_14560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhob04147
]
HTY51_14560
Enzymes [BR:
rhob01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HTY51_14560
Lipid biosynthesis proteins [BR:
rhob01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HTY51_14560
Exosome [BR:
rhob04147
]
Exosomal proteins
Exosomal proteins of breast milk
HTY51_14560
Exosomal proteins of breast cancer cells
HTY51_14560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QKO23013
UniProt:
A0A6N0BUF3
LinkDB
All DBs
Position
complement(3025210..3027147)
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AA seq
645 aa
AA seq
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MQTTFPRLLMQHAAQRPEAPAMREKEYGIWQTWSWARAAEDVRLMSCGLAALGFQPGQNL
AIVGDNRPHLYQAFIAAQSLRGVPVPMYQDAIASEMAFVLEDAEIHFAFAENQEQVDKLL
ELRESVPGLLQHIVFDDPRGLRNYQHEGLISIARLFELGRQYEQQHPDFYRNSVESGQPS
DVSVILYTSGTTGRPKGVCQTHQSFIEAARGGVLVDGLVPEDNIISYLPPAWVGDHLFSI
AQWLVAGFTTNCPESAETVSIDLREIGPSYYFAPPRVFESMLTSVSIRMEDAAAPKRWLY
KQFMDVARRCGAEILDGHKVSFTDRLLYALGNALVYGPLRNVLGLSRIRVAYTAGAAIGP
DLFRFYRSIGINLKQLYGQTETCAYVCIQKNGRVKLNSVGEAAPGIEIKIADNGEVLVRG
VSVLKEYYKRPDATAEVMDVEGYFHTGDAGVIDPDGHLIIIDRAKDVGKMASGAIFAPNY
IENKLKFFPQIKEAVCFGHGRGQVCAFINIDFEAVGNWAERQGLPYSGYVDLASKPAVLD
MLADCVQQVNVDLAAEAGMADTQIARFLVLHKELDPDDDELTRTRKVRRGFIGDKYAVLI
EALYEGRKEQFIETQVKFEDGRTGTVSATLPIRDAKRYPGAAKVA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgacttttcccagacttctgatgcagcatgcggcgcagcggcccgaggccccg
gccatgcgcgagaaggaatacggcatctggcagacctggagttgggcgcgcgccgccgag
gacgtgcgcctcatgagctgcggcctggcggcgctgggtttccagcccgggcagaacctg
gccatcgtgggcgacaaccggccgcacctctaccaggccttcattgcggcgcaaagcctg
cgcggtgtgcccgtgcccatgtaccaggacgccatcgccagcgagatggcctttgtgctg
gaagacgcggaaatccatttcgccttcgccgaaaaccaggagcaggtcgacaagctgctg
gagctgcgcgagagcgtgcccggcctgctgcagcacatcgttttcgatgacccgcgcggc
ctgcgcaactaccagcacgaagggctgatcagcatagcccgcctgttcgagctggggcgc
cagtacgagcagcagcacccggacttctatcggaactcagtcgaatcgggccagccttcc
gacgtctcggtcatcctctacacctcgggcacgacgggccggcccaagggcgtgtgccag
acgcaccagagtttcatcgaggcggcccggggcggcgtgctggtggacggcctggtgccc
gaggacaacatcatttcctacctgccgccggcctgggtgggtgaccacctcttctccatc
gcccagtggctggtggcgggtttcaccaccaactgccccgagtcggccgagacggtgagc
attgatctgcgcgagatcgggccgagttattacttcgcgcccccgcgggtgttcgagagc
atgctgacctcggtctccatccgcatggaagacgccgcggccccgaaacgctggctctac
aaacagttcatggacgtggcgcggcgctgcggcgccgagatcctggacgggcacaaggtg
tcgttcacggaccgcctgctctacgccctgggcaatgcgctggtctacggcccgctgcgc
aatgtgctgggcctctcgcgcatccgggtggcctacacggcgggcgcggccatcgggccg
gacctgttccgcttctaccgctccatcggcatcaacctcaagcagctctacggccagacc
gagacctgcgcctacgtctgcatccagaagaacggccgcgtcaagctcaacagcgtgggc
gaggcggcgccgggcatcgagatcaagattgccgacaacggcgaagtgctggtgcgtggc
gtttcggtgctcaaggagtactacaaacgacccgatgccaccgccgaggtgatggatgtc
gagggttatttccacaccggcgacgccggcgtgatcgacccggatggccacctgatcatc
atcgaccgggccaaggacgtgggcaagatggccagcggcgccatctttgcgcccaactac
atcgagaacaagctcaagttcttcccgcagatcaaggaggcggtgtgcttcggccacggc
cgcggtcaggtctgcgccttcatcaacatcgacttcgaggcggtgggcaactgggccgaa
cgccagggcctgccctacagcggttacgtggacctggcgagcaagccggcggtgctggac
atgctggccgactgcgtgcagcaggtcaacgtggacctggcggccgaggccggtatggcc
gacacgcagattgcccgtttcctggtgctgcacaaggaactggaccccgacgacgacgag
ctgacccgcacacgcaaggtgcgccgcggtttcatcggcgacaagtacgcggtgctgatc
gaggccctgtacgagggtcgcaaggaacagttcatcgaaacgcaggtgaagttcgaggac
ggccgcaccggcaccgtctcggccacgctgcccatccgtgacgccaaacgctacccgggc
gcggccaaggtcgcctga
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