Rhodoferax sp. BAB1: HTY51_14730
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Entry
HTY51_14730 CDS
T08955
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HTY51_14730 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhob03021
]
HTY51_14730 (rpoA)
03400 DNA repair and recombination proteins [BR:
rhob03400
]
HTY51_14730 (rpoA)
Enzymes [BR:
rhob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HTY51_14730 (rpoA)
Transcription machinery [BR:
rhob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HTY51_14730 (rpoA)
DNA repair and recombination proteins [BR:
rhob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HTY51_14730 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QKO23044
LinkDB
All DBs
Position
complement(3064533..3065522)
Genome browser
AA seq
329 aa
AA seq
DB search
MQTSLLKPKAINVEQLGPNRAKVALEPFERGYGHTLGNALRRVLLSSMPGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAADIQTPHDVEI
INPDHVIATLSAGGKLDMQIKVEKGRGYVPGTMRRYGDEPTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGSELAAFDA
PAPRSGSQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSL
NEIKEVLASRGLTLGMKLENWPPAALEKR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtctgctgaaacccaaagcaatcaacgtcgaacaactcggcccgaaccgc
gccaaagtggcgctggagccgtttgagcgtggttatggccacaccctgggcaacgcgctg
cgccgcgtcctgctgtcgtcgatgccgggttacgctgccaccgaggtgaccattgccggc
gtgctgcacgagtactcgtccatcgacggcgtgcaggaagacgtggtcaacattctgctg
aacctcaaaggtgtggtgttcaagctgcacaaccgcgacgaagtcacgctgagcctgcgc
aaggacggcgagggcgtcgtcacggcggctgacatccagaccccgcacgatgtcgagatc
atcaatcccgaccacgtgatcgccacgctgtcggccggtggcaagctcgacatgcagatc
aaggtcgagaagggccgcggttacgtgcccggcaccatgcgccgttacggcgacgagccg
accaagtcgatcggccgcatcgtgctcgacgcttccttctccccggtcaagcgcgtgagc
tacaccgtcgagagcgcccgcgtcgagcagcgtaccgacctggacaagctggtcgtcgag
atcgagaccaatggcgccatcaccgccgaagacgccgtgcgcgcttcggccaagatcctg
gtcgaacagctggccgtgttcgcccagctcgagggcagcgaactcgccgccttcgacgca
ccagcaccgcgcagcggcagccagttcgacccgatcctgttgcgtccggtcgacgaactc
gaactgaccgtacgttcggccaactgcctgaaggccgagaacatctattacatcggcgac
ctgatccagcgctccgagaacgaactgctcaagaccccgaacctgggtcgcaagtcgctc
aacgagatcaaggaagtgctggcttcgcgcggtctgaccctgggtatgaagctcgagaac
tggccgccggccgcgctcgagaagcgttga
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