Fontisubflavum oceani: QTA57_02410
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Entry
QTA57_02410 CDS
T09173
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhoc
Fontisubflavum oceani
Pathway
rhoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QTA57_02410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoc03400
]
QTA57_02410
Enzymes [BR:
rhoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QTA57_02410
DNA repair and recombination proteins [BR:
rhoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QTA57_02410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
PriA_3primeBD
Helicase_C
AAA_22
AAA_30
MarR_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WJY22050
LinkDB
All DBs
Position
complement(459946..462150)
Genome browser
AA seq
734 aa
AA seq
DB search
MRKEMSQDYFAEGELVGVLTTEPLDRVLDYKAPEGGCWLGAFVEVPLGPRKVLGVVWGPG
RGDWDIAKVRAVNRVLDVAPMRGELRGFLEKAGAYTLTSMPAMLRLATRAPGLSDPPSMR
KVYRLGASVPDRMTDARRRVLAVLEEYGGLAFTLKELSEMAGVTSSVVKGLAAQGAVEEA
DTPRDAPYLPLDPDRSGKDLTEDQTVAAKVLREAVGSGTYGTTLLKGVTGSGKTEVYLEA
VAACLKAGRQALVLLPEIALTSEFLTRVEQRFGAKPAEWHSGVTMTERRRCWRMLGQGAA
QLVVGARSALFLPFRDLGLIVVDEEHDTSYKQEDGVLYNARDMAVLRASINAAQVVLASA
TPSLESWANAEAGKYARLDLTARFGEAVLPEMRAIDMRMEDLPGDAWVSPSLQAAVKRRL
ADGEQSLLFLNRRGYAPVTICRACGHQVGCDNCDARMVEHRFQKRLMCHQCGETKPMPLA
CPECKVEGKMAAVGPGVERLAEEAAKLFPDAKLAVLSSDLFGSARALKAQIEEIAQGETD
IIIGTQLVAKGHNFPRLTLVGVIDADLGLQGSDLRAAERTFQLMRQVSGRAGRVDKPGVA
LMQTFQPDHPVIRAILSGDEEGFWRAEAEERQQAGMPPYGRMAGIILSGPDAAQVFDLGT
HLARTDAPLRALGATVYGPAPAAIARIRGRHRVRLLVKAPKGVALQPAIAEWTQGLKLKG
GLRLAVDIDPQSFY
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagagatgagccaagactatttcgcagaaggagagctggtgggcgtgttgacc
accgagccgctggaccgggtgctggattataaagcgcccgaaggcggctgctggctgggt
gcgtttgtcgaggtgccattggggccgcgcaaggttttgggtgtggtctgggggccgggc
cggggcgattgggatattgccaaggtgcgcgcggtgaaccgggtcttggatgtggccccg
atgcgcggagagttgcgcgggtttttggagaaggcgggggcatatacgctgacctccatg
cccgcgatgctgcgcctagcgacccgcgcgccagggttgtcggacccgccctcgatgcgg
aaggtctatcgcctgggtgcgtctgtgccggatcggatgaccgatgcacgacggcgggtt
ttggcggtgttggaggagtatggcggcttggccttcacgctgaaggaactcagcgagatg
gccggggtgacctcctcggtcgtgaaaggtttggcggcgcagggcgcggtggaagaagcc
gatacgccgcgtgatgcgccctatctcccgcttgacccagaccgctcgggcaaagacctg
accgaggatcagacggtcgccgccaaggtgttgcgcgaggcggttggctccggcacctat
ggcacgacgcttttgaagggcgtcaccgggtcgggcaagaccgaggtgtatctagaggcc
gtcgcggcctgtttgaaagcggggcggcaggcgctggtgcttttgccggagattgcgctg
acctcagagtttctaacccgggtcgagcagcgctttggcgcaaaaccggcggaatggcat
tccggcgtgacgatgacagaacgtcgccgctgttggcggatgttggggcagggcgcggcg
cagcttgtggtgggcgcgcggtctgcgctgtttttgccgttccgcgatctgggtctgatc
gttgtcgatgaagagcacgatacctcctataaacaggaggacggggttctttacaacgcg
cgcgatatggcggtgcttcgcgcgtcgatcaacgccgcccaggtggtgctggcctcggcc
acgccgtccttggaaagttgggccaatgccgaggctgggaaatacgcgcgccttgatctg
accgcgcggtttggcgaggcggttttgcccgaaatgcgggcgatcgacatgcggatggag
gatttgccgggcgatgcctgggtctcgcccagtttgcaagcggcggtgaagcggcggctg
gccgatggggagcaatcgctgttgtttctgaaccgtcgcggttatgcgccagtcacgatc
tgccgggcctgcgggcatcaggttggctgtgacaattgcgatgcgcggatggtggagcat
cggtttcagaaacgcctgatgtgccaccaatgcggggagacgaaaccgatgccgctggcc
tgcccggagtgcaaggtcgaggggaagatggccgccgttggcccgggcgtggagcggctg
gccgaagaggctgcgaagcttttcccggatgcgaaactggcggttctttcctccgatctg
ttcggctctgcccgagcgttgaaagcgcagatcgaagagattgcgcagggcgagaccgac
atcattattggcacgcaactggtggccaagggccataatttcccgcgtttgacactggtc
ggtgtcatcgacgccgatctgggcctgcaaggctccgacctgcgcgccgccgaacgcacg
tttcagttgatgcgacaggtctcgggccgggcgggtcgggtggacaagcccggtgtcgcc
ctgatgcagacctttcagcccgatcatccggtgatccgcgcgatcctgtcgggcgatgaa
gaggggttctggcgggccgaggcggaggagcggcaacaggccggcatgccgccttatggc
cggatggcggggatcatcctgtccggccccgatgcggcgcaagtctttgatcttggaacg
catctggcgcgcaccgatgcaccgctccgcgcgcttggggcgacggtttatggccccgcc
cccgcggcgatcgcgcgtatccgggggcggcaccgggtgcgccttttggtcaaagcgccc
aagggtgtggcgctgcagcctgcgattgcggagtggactcaaggattgaagctcaaaggc
gggttgcgccttgccgtcgatatcgacccgcagagcttctactaa
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