Fontisubflavum oceani: QTA57_03335
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Entry
QTA57_03335 CDS
T09173
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhoc
Fontisubflavum oceani
Pathway
rhoc03030
DNA replication
rhoc03430
Mismatch repair
rhoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QTA57_03335
03430 Mismatch repair
QTA57_03335
03440 Homologous recombination
QTA57_03335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoc03032
]
QTA57_03335
03400 DNA repair and recombination proteins [BR:
rhoc03400
]
QTA57_03335
Enzymes [BR:
rhoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QTA57_03335
DNA replication proteins [BR:
rhoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QTA57_03335
DNA repair and recombination proteins [BR:
rhoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QTA57_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_5
RuvB_N
AAA_16
AAA_19
AAA_14
AAA_18
DUF815
AAA_assoc_2
AAA_24
SLFN-g3_helicase
TsaE
Rad17
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WJY22214
LinkDB
All DBs
Position
659797..661539
Genome browser
AA seq
580 aa
AA seq
DB search
MSDTQDTGYQVLARKYRPASFADLIGQDAMVRTLKNAFAADRIAQAFILTGIRGTGKTTT
ARIIAKGLNCVGPDGESGPTTEPCGQCEPCQAIAEGRHVDVLEMDAASRTGVGDIREIID
SVHYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSR
CQRFDLRRIEPEVMIAHLSSIAGKENAEISEDALALITRAAEGSVRDAMSLMDQAISHGA
GETTVDQVRAMLGLADRGRVLDLFEMIMSGDAAGALNELGAQYADGADPMAVLRDLAEIT
HWLSVIKITPEAVNDPTISPDERSRGQGLAEKLPMRVLSRMWQMLLKALEEVALAPNPMM
AAEMAVIRLTHVADLPSPEDLLRKLSNTPAPAPGAATQSTPAPSGAPTGPQGQSRSGPTG
RGGAQPAVAEMSETALAHYPTFQSVVALIEANRDIKLLVEVKTTLRLVSYQPGRIEFQPT
ERAPADLAQRLGQSLKGWTGVRWAVSVVAEGGGETIEEQQNADLAALKAEAEAHPMMQAV
IAAFPSAKITEIRTREEIAAEAAIEALPEVDDEWDPFEDD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacccaagacaccggttaccaggttctggcgcggaaatatcgcccggcaagc
tttgccgatctgatcgggcaggacgccatggtgcgaacgcttaaaaacgccttcgccgcc
gaccggatcgcgcaggcgtttatcctgaccggcattcgcgggaccggcaaaaccaccacc
gcccggatcatcgccaaaggcctgaactgcgttggtcccgatggcgagagcggccccacg
accgagccatgcggccaatgtgaaccctgtcaggcgattgccgaagggcggcatgtggat
gtgttggagatggacgcggcctcgcgcacaggcgtgggcgacatccgcgaaatcatcgat
tcggtgcattatcgggcggcctcggcgcgctacaaaatctacattatcgatgaagtgcac
atgctctcgaccagcgccttcaacgcgctgttgaagacgttggaagagccgcccgcccat
gtgaagttcatctttgcgacaaccgaaattcgcaaggtgcccgtgaccgtcctgtcgcgg
tgtcagcgcttcgatctgcggcggattgagcccgaggtgatgatcgcgcatctgagctca
attgcgggtaaagagaatgcggagatttccgaagacgcgctggcgctgatcacccgcgcg
gcagagggctccgtccgcgatgcgatgagtttgatggatcaggcgatttcccatggtgcg
ggagaaaccacggtcgatcaggtgcgcgcgatgctgggcctcgcggatcgtggccgggtt
ttggacctgttcgagatgatcatgtcgggcgatgcggcgggggcgctgaacgagcttggc
gcgcaatatgccgatggcgccgacccgatggcggtgctgcgcgatctggccgagatcacc
cattggctgtcggtgatcaagatcacacccgaagcggtgaatgacccgacgatcagcccc
gacgagcgcagccggggccaaggcctggccgagaaactgccgatgcgggttctctcacgc
atgtggcagatgctgttgaaagcgctggaagaggtggcgcttgcccccaatccgatgatg
gccgccgaaatggcggtgatccggctgacccatgtcgccgatctgccgagcccggaagat
ttgctgcgaaaactgtccaatacacccgcgccggcccccggtgcggcaacacaatcgacg
cccgccccatcaggcgcgccgacggggccgcagggtcaaagccgctctggccccacagga
cggggcggggcgcagccggctgtggccgaaatgtcggaaacggcacttgcgcattacccg
accttccaaagcgtggtggcgttgattgaggccaaccgcgacatcaaactgctcgtcgag
gtaaagaccaccctgcgtctggtctcctatcagcccggccggatcgagtttcagccgacc
gaacgcgcccccgccgatctggcacagcggcttggccagagcctgaaaggctggaccggg
gtccggtgggccgtgtcggtggtcgccgagggcggtggcgagacgatagaggaacagcaa
aacgccgacctcgcggcgctcaaggccgaagccgaggcgcatcccatgatgcaagccgtc
attgccgcattcccaagcgcgaaaatcaccgagattcgcacccgcgaagagatcgccgct
gaggccgccatcgaggcgttgccggaagtggatgacgaatgggacccgttcgaagacgac
tag
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integrated database retrieval system
