Fontisubflavum oceani: QTA57_03935
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Entry
QTA57_03935 CDS
T09173
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
rhoc
Fontisubflavum oceani
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhoc03009
]
QTA57_03935
03016 Transfer RNA biogenesis [BR:
rhoc03016
]
QTA57_03935
Enzymes [BR:
rhoc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
QTA57_03935
5.4.99.29 23S rRNA pseudouridine746 synthase
QTA57_03935
Ribosome biogenesis [BR:
rhoc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QTA57_03935
Transfer RNA biogenesis [BR:
rhoc03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
QTA57_03935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WJY22307
LinkDB
All DBs
Position
773626..774276
Genome browser
AA seq
216 aa
AA seq
DB search
MTSLDYRPPTAPLDVIYEDHELILVNKPSRLLSVPGKGDHLSDCLLSRVQAAFPEALLVH
RLDMDTSGVMVFARSPHAQRHLGLQFEKRQMKKVYVARVWGEMAEKEGHIDLPLIVDWPN
RPLQHVNHEIGKPAQTNWRVVRVEDVTTRVRLYPKTGRSHQLRVHMKEIGHPILGDPFYA
EGAARDYPRLMLHAESLKLRHPDGGKGMSFRAKVPF
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctcgactatcgcccaccaacggccccattggacgtgatctacgaagatcac
gagttgattttggtcaacaaacccagtaggttgttgagtgtgccgggcaagggggaccac
ctatcggactgcctgctcagccgggtgcaggcagcctttccagaggcgcttttggtgcat
cggctggatatggacacctccggcgtgatggtgttcgcgcgcagcccgcatgcgcaacgt
catctgggtctgcaattcgagaaacgccagatgaagaaggtctatgtcgcccgcgtttgg
ggggagatggcggagaaagaggggcatatcgacctgcccttgatcgtggattggccgaac
cgcccgttgcagcatgtgaaccatgagatcggcaaaccggcgcaaaccaattggcgggtg
gtgcgggttgaagatgtgacaacgcgggtgcgcctctaccccaaaactggccggtcacat
cagttgcgggttcatatgaaagaaatcggccatccgattctgggcgatccgttttacgcc
gagggggccgcgcgcgattatccccggttgatgctacatgcggagagcttgaagctgcgc
catcccgatggtggcaaaggcatgagcttccgagcgaaggtgccgttttaa
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