Fontisubflavum oceani: QTA57_04005
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Entry
QTA57_04005 CDS
T09173
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhoc
Fontisubflavum oceani
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoc03016
]
QTA57_04005 (truB)
Enzymes [BR:
rhoc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QTA57_04005 (truB)
Transfer RNA biogenesis [BR:
rhoc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QTA57_04005 (truB)
Prokaryotic type
QTA57_04005 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WJY22319
LinkDB
All DBs
Position
complement(786154..787056)
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AA seq
300 aa
AA seq
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MARKRKGRDISGWLVVDKPAGLTSTAVVNKVKWAFDAKKAGHAGTLDPEATGVLAVALGE
ATKTVPYVTDAMKAYTFIIRLGQATNTDDAEGEGIAESDLRPSDAEITAALPSFEGDIAQ
VPPQYSAVKIVGQRAYKLARDGEDLELAARPLYVESLKLLSRPDADHAELELICGKGGYV
RAIARDLGEKLGCYAHVRHLRRIWSGPFDVEEGVTLEQIEALARSEEIDTLLLPLEIGLS
DLPQLTCTDLGAARLKNGNPGEVITSAEYGEECWAAHDGTPVAVGIYRGGTLHPHRVFNL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaaacgcaaagggcgggatatctcaggctggctggtggtggacaaacccgcc
gggctgacctcgaccgctgttgtgaacaaggtgaaatgggcgttcgacgcgaagaaggcg
ggccacgccggcacgctcgatcccgaggcgaccggtgtgctggccgtggcactgggtgaa
gcgacgaagaccgtgccctacgtcactgacgcgatgaaagcttacaccttcatcatccgt
ctggggcaggccaccaataccgacgatgccgaaggcgaagggattgccgagagcgacctg
cgcccaagtgacgccgagatcacagcggcgttgccgtctttcgaaggggatatcgcgcaa
gtcccgccgcaatactccgccgtcaaaatcgttggtcagcgcgcctataagctggcgcgc
gatggcgaggatctcgaactggccgcgcgcccgctttatgtggagagcctgaaactgctc
agtcggcctgatgctgatcatgccgaattggaactgatttgtggcaaaggcgggtatgtc
cgcgcgattgcccgcgatcttggtgagaagctgggttgctacgcccatgtgcggcatctg
cggcgcatttggtcggggccgttcgatgtggaggagggcgtgactttggagcagattgag
gcgctcgcccggtccgaggaaatcgacacgttgctcttacccttggaaatcggtctatct
gacttgccgcaactgacctgcaccgatcttggcgcagcccgcctcaaaaacggcaatccg
ggggaggtgattacctcggccgagtatggcgaagagtgttgggcggcgcatgacggcacg
cccgtggcggtcggcatttaccggggcggcacgctgcatccgcatcgtgtgttcaaccta
tga
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