Fontisubflavum oceani: QTA57_05545
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Entry
QTA57_05545 CDS
T09173
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rhoc
Fontisubflavum oceani
Pathway
rhoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QTA57_05545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoc03019
]
QTA57_05545
Messenger RNA biogenesis [BR:
rhoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QTA57_05545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
WJY22583
LinkDB
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Position
complement(1091378..1091857)
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AA seq
159 aa
AA seq
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MTPGEIAALPYRPCVGVVLINADGLVFAGQRADMETPAWQMPQGGVDKGETPKAAAFREL
REETGVAADHVTLLGQTADWLPYDLPLEVVPKRWGGKFRGQKQMWYLMRLDAGDEVINLT
YKDVEFSQWRWMTGQDLLNVIVPFKRPIYEAVLTEFRLV
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgggcgagatcgcggcgctgccctatcggccttgcgtcggcgttgtgttgatc
aacgccgacggattggtttttgccggtcaacgcgccgatatggagacgcccgcctggcag
atgccacaaggcggcgtcgataaaggcgaaacgccgaaagccgccgcgtttcgcgagctt
cgtgaggaaaccggtgtcgcagcggatcatgtaacacttctgggacagaccgccgattgg
ctgccttatgacctgccgcttgaggttgtccccaaacgatggggcggcaagttccgcggc
cagaaacagatgtggtatctgatgcggctcgacgcaggcgacgaggtgatcaaccttacc
tataaagatgtcgaattctcgcagtggcgctggatgaccggccaggatttgctcaatgta
atcgtcccgttcaaacggccgatctatgaggcggttttgacggagttcaggctggtttga
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