Fontisubflavum oceani: QTA57_05930
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Entry
QTA57_05930 CDS
T09173
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhoc
Fontisubflavum oceani
Pathway
rhoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QTA57_05930 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoc03019
]
QTA57_05930 (recQ)
03400 DNA repair and recombination proteins [BR:
rhoc03400
]
QTA57_05930 (recQ)
Enzymes [BR:
rhoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QTA57_05930 (recQ)
Messenger RNA biogenesis [BR:
rhoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QTA57_05930 (recQ)
DNA repair and recombination proteins [BR:
rhoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QTA57_05930 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Ntox43
Motif
Other DBs
NCBI-ProteinID:
WJY22648
LinkDB
All DBs
Position
1170180..1172222
Genome browser
AA seq
680 aa
AA seq
DB search
MQDPERLLSSVFGFESFRPGQEEIVKAVAAGRNTLAIMPTGGGKSLCFQLPALMQDGVTV
VISPLIALMRDQVRALRAVGVEAGALTSGNTPDETDAVWDGLEAGTLKLLYIAPERLAAS
GTERMLKRVGVAMIAVDEAHCVSQWGHDFRPDYLRIGALRKTLNVPLAAFTATADAETRA
EIVERLFDGTAPDTFLRGFDRPNLALAFEVKNNPRRQILSFAAARKGQSGIVYCGTRAKT
ETLAKALREEGHTACHYHAGMDAEDRRIVETRFSREDGLIVVATIAFGMGVDKPDIRWVA
HADLPKSIEGYYQEIGRAGRDGAPADTLTLFGPDDIRFRRQQIDEGLAPSERKSADHGRL
NALLGLAEALGCRRQVLLGYFGEDADPCGNCDLCATPPETFDGTQPVRKALSAILRTGEH
FGAGHLIDILMGHETDKIRQRGHDQLPTFGVGTEFDKRGWQAVFRQMAAHDLVRPDPERF
GALRMTQAARPILKDEASITLRKDSIAKAPRRPAVKTLVSEEDAPLLSALKAKRRALAEE
ARVPAYVVFTDRTLIEMAETRPQTLDEMARISGVGAKKLESFGAAFLVVITGETPAPAHP
ARRKLAGREAGALYDQLLAVQTDLTRGPEGADKPMSCSSSQLAKVAEVRPDDLSALTRLL
GDRHAERFGAAFLEVLREAS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaccccgagagacttctgtcttccgtcttcggctttgaaagcttccgccccggg
caggaagagatcgtgaaggccgtcgcagccgggcgaaacaccctggccatcatgccgacc
ggcggcgggaaatccctttgtttccagctccccgcgctcatgcaagatggcgtgaccgtg
gtcatctcgccgttgattgccctgatgcgagatcaggtgcgagctttgcgggcggttggt
gttgaggcgggcgcgctgacctctggcaacacgccggatgaaaccgatgccgtatgggat
gggttggaggcggggacgttaaagctgctctatatcgcgccagagcggttggcggcgtcg
ggcaccgagcgaatgctgaaacgcgttggcgttgcgatgatcgcggtggacgaggcgcat
tgtgttagccagtggggtcatgattttcgccccgattatctgcgcatcggtgctttgcgg
aagacgctcaatgttccgctggcggctttcaccgcgacggcggatgccgagacacgtgcc
gagattgtcgagcggttgtttgatggcactgcgccggacaccttcctgcgtggctttgac
aggcccaatctcgcgctggcctttgaggtcaagaacaacccgcgccgtcaaatcctcagc
tttgccgcggctcggaaaggacaatctggcatcgtctattgcggcacccgcgcgaagacc
gagacgcttgccaaagcgctccgcgaggaagggcatacagcttgccattatcatgccggg
atggatgctgaagatcgccgcatcgtcgagacgcggttttcgcgtgaagacgggttgatt
gtggtcgccacaatcgcctttggcatgggcgtggataaaccggatattcggtgggtcgcc
catgcggatttgccgaaatcgattgagggatattatcaagaaattggccgcgccgggcgc
gatggggcaccggccgatacgctcacgctgtttggcccggatgacatccggtttcgtcgt
caacagatcgacgaaggtctcgcgccttcggaacggaaatcggcggatcatgggcggctc
aacgcgcttctgggtctggccgaggcgctcgggtgtcgccgtcaggtcttgcttgggtat
tttggcgaagatgcggacccttgtggcaattgcgatctctgtgcgacgccgccggaaacc
ttcgatggcacgcaaccggtgcgcaaagcgctctctgcgattctgcgcactggcgagcat
ttcggtgcaggccatctgatcgacattctgatgggccatgagacagacaaaatccgtcag
cgtgggcacgatcaactgcccacattcggcgtcgggaccgagtttgacaaacgcggctgg
caggcggtttttcggcagatggcggcgcatgatttggtgcggcccgacccggagcggttt
ggcgcgctgcggatgacgcaagccgcgcgcccgattttgaaagacgaggcgtcgatcacg
ctgcgaaaagacagtattgctaaggcgccgcgccgccccgccgtcaagacgctggtgagt
gaggaagatgcgccgctgctctcggcgctgaaagccaaacgccgcgccttggcggaggag
gcgcgcgtgccggcctatgtggtgttcaccgaccgcaccttgatcgagatggctgagacc
cggccgcaaacgctggacgagatggcccgtattagcggtgtgggcgcgaagaagctggag
agttttggcgcggcctttctggtcgtgataaccggcgagacgcccgcaccggcgcatccg
gcgcgtcggaaactggcgggtcgggaagccggtgcgctctatgaccagcttttggccgtg
cagacggatctcacccgcggaccggagggggccgataagccgatgagctgttcctcatcg
caattggcaaaggtggcggaggtcaggccagacgacctcagtgcgctgacacgccttttg
ggtgaccgtcatgcggagcgatttggcgcggcctttctggaggtgttgcgagaggcgagc
tag
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integrated database retrieval system
