Fontisubflavum oceani: QTA57_07895
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Entry
QTA57_07895 CDS
T09173
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
rhoc
Fontisubflavum oceani
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhoc03021
]
QTA57_07895
Transcription machinery [BR:
rhoc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QTA57_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
WJY22988
LinkDB
All DBs
Position
complement(1530259..1531119)
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AA seq
286 aa
AA seq
DB search
MNKPVPNFGRHARRRRSADMLSAEEERHLVRAWQDRGDRRARDKLIHAFAPLAASIAKRF
MRGSGQADPDLIQQANIGLMKAADRFDVDRENRFASYAIWWIRAEIQDYARANKSIVKRP
NSAQTRKAAAQIAALEAEMATGLRISRAEADKRLAEALGIDIERVAELRAQISGRDHSLN
APALGDDGEDRIALLVDPDSLEDPAPLRKLEATALRRALVDALSGLPDRERDIVVATQLH
DPPATLECLGAQYGVSRERIRQLRERGFERLRESMYLRNFGPEYFT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacctgtccccaatttcggccgccacgcgcgccgcaggcgcagtgccgacatg
ctctccgcggaggaggaacgtcatctggttcgcgcctggcaggaccgcggcgaccggcgc
gcccgcgacaagctgatccatgcctttgcccccttggccgcgtcgattgcgaaacgcttc
atgcgagggtctggacaggctgacccggatttgatccagcaagcgaatatcgggctgatg
aaggccgccgaccggttcgatgtcgatcgcgaaaatcgctttgccagctatgcaatctgg
tggatacgcgccgagattcaggattatgcacgcgccaataagtcgatcgtcaagcggccc
aactccgcgcaaacccgcaaggcagcggcgcaaatcgcggctcttgaggctgagatggcg
accgggctgcggattagccgtgcggaggccgacaaacggctcgccgaggcgctcggcata
gatatcgaacgggttgctgagttgcgtgcgcaaatcagcggtcgcgatcattccctgaac
gcacccgcccttggcgatgatggggaagatcgtatcgcgctcctggttgatccggacagt
ctcgaggatcccgcgcccctgcgaaagctcgaagcgacagcactgcgccgggcgcttgtc
gatgccttatccggcttgcctgaccgggaacgcgatatcgtcgtcgcgacccaactccat
gacccacccgcgacgcttgaatgtctcggtgcgcaatacggcgtctcgagggaacggatt
cgacagctccgcgagcgcggtttcgagcgcctgcgagagagtatgtacctgcggaatttc
gggccagagtatttcacctga
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