Fontisubflavum oceani: QTA57_08425
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Entry
QTA57_08425 CDS
T09173
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rhoc
Fontisubflavum oceani
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoc03016
]
QTA57_08425 (truA)
Enzymes [BR:
rhoc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
QTA57_08425 (truA)
Transfer RNA biogenesis [BR:
rhoc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QTA57_08425 (truA)
Prokaryotic type
QTA57_08425 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WJY23083
LinkDB
All DBs
Position
complement(1621056..1621835)
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AA seq
259 aa
AA seq
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MPRYALRLEYNGAPFAGWQRQADRPSVQGALEDALAKLEADVPTIAAAGRTDAGVHAWGQ
VAHCDMAQDWTPFRLSEALNYHLRPAPVAVLACAKVDDEWHARFSARERRYLYRVINRRA
PLVLEAGQAWLVKASLSLEPMQEAAQHLIGRHDFTTFRSTECQAASPVKTLDAIEITTLE
TPRGREFQFRLRARSFLHNQVRSLVGTLERVGAGTWTPEDAKAALEAADRQACGPVAPPY
GLCMTGVGYPDDPFEASAP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgatatgccctcagactcgaatataacggcgcgccgtttgccggttggcaacgc
caagccgaccgcccaagcgtacaaggcgctctggaagacgcgctggccaaattggaggcc
gatgtgccgacaatcgccgccgccggacggaccgatgcgggcgtgcatgcctggggtcag
gtcgcccattgcgacatggcacaggactggacaccgttccgcctgtctgaggcgctcaac
taccatttgcggcccgccccggtggcggttttggcctgtgccaaggtcgacgatgagtgg
catgcccggttttccgcacgcgaacggcgctatctttaccgggtgataaaccgccgcgcg
ccgctggtcctggaggcgggtcaagcctggctagtgaaggcgtctttgtcgctagagccg
atgcaggaggccgcccaacacctgatcgggcggcatgatttcaccaccttccgctcgacg
gagtgccaggccgccagcccggtcaaaaccctcgacgcgattgaaatcacgacgctagag
acaccccgcggccgagagtttcagtttcgcctgcgcgcacgatccttcctgcacaatcag
gtgcgctcgcttgtgggcacattggagcgggtcggcgcgggcacatggacccctgaagac
gcaaaagccgcgctcgaggccgctgatcgccaagcctgcggtcccgtcgcgccgccttac
gggctttgcatgactggcgtagggtatccagacgacccgtttgaggccagcgcgccatga
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