Fontisubflavum oceani: QTA57_10225
Help
Entry
QTA57_10225 CDS
T09173
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rhoc
Fontisubflavum oceani
Pathway
rhoc03410
Base excision repair
rhoc03430
Mismatch repair
rhoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QTA57_10225 (recJ)
03430 Mismatch repair
QTA57_10225 (recJ)
03440 Homologous recombination
QTA57_10225 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoc03400
]
QTA57_10225 (recJ)
DNA repair and recombination proteins [BR:
rhoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QTA57_10225 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QTA57_10225 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QTA57_10225 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
WJY20260
LinkDB
All DBs
Position
complement(1979853..1981595)
Genome browser
AA seq
580 aa
AA seq
DB search
MTAFLDVETSLTGRRWVGPTIEQERLAEALRQQAGQPPAVAQVLARRGVTPEAAESFLAP
ALRDLLPDPMSLRDMAPAAERVLAALTAREKIAIFADYDVDGGSSAALLLDWLRQAGHDA
KLYIPDRIDEGYGPNDAAMADLAKTHTLIICVDCGTLSHGPIVAARGADVIVLDHHLAGA
DLPDCVAVVNPNRQDESGDLGHLCAAAVVFLLLVELNRRQRAKGITGPDLMAMLDLVALA
TVADVAQLTGVNRAFVRQGLTVMGRRARPGLAALSDVARLDRAPTSYHLGFVLGPRVNAG
GRIGQADLGARLLATRDPSEAQTLAKRLDDLNTDRRDIEAQVRDAALAQAETRGLDGPLV
WAAADGWHPGVVGIVASRLKEATNRPAVVIGFDGDDGKGSGRSISGVDLGASIQRLAAEG
LLVKGGGHRMAAGLSVTRDMLEPAMARLAELLGKQGAGEAGPADLRLDGLLMPAGATPEL
IEQLEAAGPFGAGAPAPRFVFPAVRIAYTKPVGDGHLKLSFTDGGPVTIDAICFNAQQSG
LGPALEAHGGRKAHLAGRIEINHWQGRQRVQLRLEDAAWA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgtttcttgatgtcgaaacctcactcaccgggcgccgatgggtcggccccacg
attgagcaagagcgccttgctgaggcgctgcgccaacaagccggacagccgcccgccgtg
gcgcaggttctggcgcggcgcggtgtgacacctgaggccgcagaaagcttcctcgccccc
gcgctccgtgacctactgcccgacccgatgagcttgcgcgacatggcgcccgccgccgag
cgggtcttggccgcgctgaccgcccgcgagaagatcgcgattttcgccgattacgatgtg
gatggcgggtcaagcgccgcactgctgctggattggctgcggcaagcggggcatgacgca
aagctctatattcccgaccggatcgacgagggctatggcccgaatgacgcggcgatggcc
gatttggccaagacccataccctgatcatctgcgtggattgcggcacgctcagccacgga
ccaattgtggcggcgcgcggtgccgatgtgatcgtgctggaccaccatttggcgggagcc
gacctgcccgattgtgtcgccgtggtgaaccccaatcgacaggatgagagcggcgatctg
ggccatctctgcgccgcggccgtggtgtttctcttgctggttgagttgaaccggcggcag
cgcgccaaaggcatcaccggccccgacctgatggcgatgctcgatttggtggccttggcc
acagtggccgatgtggcgcaactgaccggggtgaaccgggcgtttgtccggcaaggtttg
actgtgatgggtcggcgcgctcggcctggccttgcggcgctgtcggatgtggcacggctc
gaccgtgcgcccacatcgtaccatctggggtttgtccttggccctcgggtcaatgcgggc
ggtcggattgggcaggccgatctcggcgcaaggctcttggcaacacgcgacccgtccgaa
gcgcagacgctcgccaaacggcttgatgacctgaacacagatcgccgcgatatcgaggcg
caggtgcgcgatgccgcgctggcccaagccgagaccagagggcttgatggcccattggtc
tgggccgccgccgatggctggcaccccggcgtggtcggcattgtcgcaagccggttgaaa
gaagccaccaaccgccctgccgtggtgattggtttcgatggggacgacggcaaaggctcg
ggccggtcgatctccggcgtcgatctcggcgcctcgatccagcgcctggctgccgaaggt
ttgctcgtcaaaggcggcgggcaccgcatggcggcaggtctcagcgtgacccgggacatg
ttggaaccggccatggcccgtctggccgaattgcttggcaaacaaggcgcgggcgaggcc
ggtcccgccgacctgcgcctagacggtctgttgatgcccgcaggggctactcctgaactg
atagagcagcttgaggccgcaggacccttcggcgctggcgcccctgcgccgcgctttgtg
tttccggcggtgcggatcgcctataccaaaccggtcggcgacggccacctgaagctgagc
ttcaccgatggcggcccggtgacgatcgatgcaatctgtttcaacgcacagcagtccggc
ctgggtccggcgctcgaagcgcatgggggccggaaagcacatctggccggtcgcatagag
atcaatcactggcaaggacggcagcgcgtccaactccgcctggaggacgccgcctgggcc
tga
DBGET
integrated database retrieval system
