Fontisubflavum oceani: QTA57_11015
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Entry
QTA57_11015 CDS
T09173
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
rhoc
Fontisubflavum oceani
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TcdB_toxin_midN
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
WJY20396
LinkDB
All DBs
Position
complement(2140792..2145375)
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AA seq
1527 aa
AA seq
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MDFIDGNPHYFSFGTLFGSTEQELERIRSLAAGDVNGDGAADLVVSYGTPGQDLTIRVAL
SDGAGFITPRIWGDSSSIPELNQGRRISVGQPLKYPSYVAMRDVNGDGRADLILTDRIDE
STGTLVRVHVDHDRDYNRFTGPQDLRDLFMMSYVYLSTGDGFVPAGPEQTSELLGVHGWG
DINGDGIEDAIARNSPGVILYGTGDVPHLLTSIRDGFGGVTGIEYVPSTAVGNNDNDVPG
VTQLVAAIERQDGRGNTRRTSYSYVGSRYDYAHRRPLGYRTITAHLPAIAGEAEGPQVVT
TYLNDHLGERGRMASQTILHDGQTQRQVINAWDVRAPDLRPFRAQQTSERTRVRYGADLV
ETTRLFEHTRYGQVSLEVTLGFTVNGVDQDPDDNQLIRTGRAFNLSDYIVDQPGWRIAQS
GSTFDAEDRARWLWREFYTHEGNADPFTAPSNSNVVRVERWTGDVSSCCARRLEEERSYD
AHGNVLSQTDARGHTTTYTYDTARHLFRLSETNALGHVATTTWDTACQAPVRVTDVNGQV
TDYTYDSHCRETRVDHPNGNWETTAYLNWGDPEQAFIQTQAPSGSSAPGAGISEHRQYVD
GFGQTYRSRTTTMLEGELDFIFIDRAFDARGNLAWESIPPSSPPPPSLELLLFPPSSLNP
RPPPIAASQRTSFVYDPLNRLTNTTAADGTLSATVFGAQSIGGIMHPLVTSHDAHCFDGD
SSTICGEIRLTLDSRGNTIARAMTDADQTDIDASGTERTTSYTYDLRNQLIGVTDPIGAT
WAYTYDVFGNRTVSDDPALGRWTMVYDANGNLTRQTDAEGQVIAITYDALNRVTRRDVTT
SGGTTTTTSTYDEAAAGEHNIGQLTTLSNPDHTIRYGYDAVGQQIRAEHSFLGRSYTLET
EYRPSGAVLRQHLPTTPGSTATAPAGDYSYDVAGRLNGFGTYIEAIAYNAWGNPTLIDYG
NTLEDLRLYDTQRGWLTDIVILDTLDTAFLRDHSDYTRSATGRISRVDSQTPAGDMNYSY
DYAGRLLTATNYAGQPAQNRVFTYDAAGSLRSNSQIGSYSYGPATGPHPHAPIAVAGQSF
TYDANGNMTTSLPLTTGLAGRMMSYDGENRPLSVTHGGATTTYTYGADGTRLLRTDPSGN
ITATFGPVEIRNFGSPAEQVLTYPHPDIRITNGTEVTYLHRDHLNSVVAMTDATGARAEA
RVYAPFGEIAWRDGGTSPDETFGYIGERYDSDAGLQYLNARYYDPRLAMFIQPDWFEVTE
PGVGTNRYAYSANDPINHMDPEGNAYSRSDRAQEVLDNYLEHSEEFGHARDQFGSVGSGV
SGTIAAKNRAAGLSGRFTFDARGNWTSSVRGGLDVTVSTNGGRPPGATIYPNSPRGASAG
AQYYYPGPPSSPHGLGHASGRPLLQNTRPGDAILLQSTPRQLISVGGRFYLQSSRGLRTT
PSGTYNFVTTPGGRILVARQNTSPNMSTHLGLSGGRDVRYGGTISFPHRHSANRGAINHW
DNASGHYRPPARLAPNAGLPMQSFRPF
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
gtggattttattgacggcaatccacattatttctcctttggcaccttgtttggatcgaca
gagcaggaacttgagcgcatccgaagcctcgcggccggggatgtcaatggcgatggcgcg
gcggatcttgtggtgtcttatggaacacctgggcaagatctgacgatccgcgtggccttg
tccgatggcgcggggtttatcacgccacggatttggggcgactccagctccatcccggaa
ctcaatcaaggccggcggatctcggtcggccagccactaaagtacccctcatatgtcgcg
atgcgggatgtgaatggcgatgggcgcgccgatctgatcctgaccgatcggattgatgag
agtacaggtacacttgttcgtgtccacgtcgatcacgaccgagattacaatagattcacc
ggccctcaggatcttcgtgatttgttcatgatgagctatgtgtacctgtcgacgggggat
ggttttgtgccggcgggtcctgagcagacgtctgagctgcttggggtccatggttggggc
gatatcaatggcgacgggattgaggatgcgattgcgcgcaacagccccggcgtgatcctc
tatggcacgggcgatgttccgcatcttctgacgtctattcgggatggttttgggggtgtt
acggggattgagtatgtgccttcgacggctgttgggaacaatgacaacgatgttccgggt
gtgacgcagcttgtggcggcgattgagcggcaggatggccgggggaacacccggcggacg
agttattcttatgtcggctcgcgctatgattacgcgcatcgtcggcccttggggtaccgc
acaatcaccgctcatctgccggcgattgcgggcgaggccgaaggcccgcaggtggtgacg
acctatctcaacgaccatttgggggagcgcgggcggatggcctcgcaaaccatcctgcat
gatgggcagacccaacgccaggtgatcaacgcttgggatgtgcgcgcgcccgatcttcgc
ccgttccgggcgcagcagacgtctgagcgcacccgggtgcgctatggcgcggacctggtc
gagacgacccggctctttgagcacacaagatacgggcaagtgtcgttggaggtcaccctt
gggttcacggtgaacggggtcgatcaggatccagatgacaaccaattgatcagaaccggt
cgagccttcaatctgtcggattacattgttgaccaacccggatggcgcatcgcccaaagc
ggttcgaccttcgatgctgaggaccgggcgcgctggctctggcgtgagttttacactcat
gaaggcaacgccgatcccttcacggcaccgtcgaacagcaatgtggtgcgggtcgagcgt
tggacgggggatgtatccagttgctgtgcgcgccgtttggaggaagagcggagctatgac
gcgcatggcaatgtgctgagccaaacggatgcgcgaggtcacacgaccacttacacctat
gacacggctcggcacctgttccgcctgagcgagaccaacgcgcttggccatgtcgcgacg
accacctgggacacggcttgccaggccccggtgcgggtcaccgatgtcaatggtcaggtc
acagactatacctatgacagccattgccgtgagacccgggtcgatcatcccaatggcaat
tgggagacaaccgcatatctcaactggggcgatccagagcaggcctttatccaaacgcag
gccccctcaggcagcagcgcgcctggtgccggcatctctgaacaccggcaatatgtcgat
ggcttcggccagacctatcgcagcagaacaacgaccatgctggaaggagaacttgatttt
atcttcatcgaccgggcttttgatgcgcgcggcaatctggcctgggagagcatcccgcct
tcttcgcctccgcctccttcgctggagctgctgctttttccgccttcttcgctgaacccg
cggcctccgccaattgccgcctctcagcgcaccagctttgtctatgatcccctcaatcgc
ctgaccaacacgacagctgccgatggcacactctccgcaacagtgtttggtgctcagagc
attggcggcatcatgcacccgcttgttaccagccatgacgcgcattgttttgatggtgac
agcagcacgatctgcggcgagattcggctgaccctggacagccgtggcaacacgattgcc
cgcgccatgacggatgcggatcagaccgatatcgatgcgtcaggtacagagcgcacgacc
agctatacctatgatctcaggaatcagctgatcggggtgaccgatccgatcggcgccact
tgggcctatacttatgacgtgtttggcaaccgcactgtctcggatgatccggcgcttggc
cgctggacgatggtttacgatgccaatggcaatctgacccggcaaaccgatgccgaaggc
caagtcatcgccatcacgtatgacgccttgaaccgggtaacccgccgcgatgtgaccaca
tcgggcggcaccaccacgaccacatcgacctatgatgaggcggcggcaggcgagcacaat
atcggccagttgaccacgctctcaaaccccgaccacacgatccgctatggctatgacgcg
gtcggacaacaaatccgggcggagcatagcttcctcgggcggagctatacgctcgagacg
gagtatcgaccctcaggcgcggtcttgcgtcagcatctgcccaccaccccgggcagtacg
gccaccgcgccggccggcgattacagctatgacgtggcgggccggctcaatgggtttggc
acctatatcgaagccattgcctataacgcttggggcaaccccacgctcatcgactatggc
aacactctcgaggatttgcggctttatgacacgcagcgcggctggctgacagatatcgtg
attttggacaccttggacaccgcattcttgcgagatcactccgactacacgcggagcgcg
acagggcggatatcgcgtgttgatagtcaaacgcctgcgggcgacatgaactacagctat
gactatgctggccggctgctaaccgcgaccaattatgccggacagcccgcgcagaaccgc
gtcttcacctatgacgcggcgggcagtctgcgctcaaactcgcaaatcggcagctatagc
tacggccccgccaccggcccgcaccctcacgcgccgattgccgtcgcaggccaaagcttc
acctatgacgccaatggcaacatgacgaccagcctgccgctgaccaccggtctggcgggg
cgcatgatgagctatgacggcgagaaccgcccgctctcggtcacccatggaggtgcgacg
accacctatacctacggtgccgacggcacgaggcttctgcgcaccgatccgtccggcaac
atcaccgccaccttcggcccggtcgagatccgcaacttcggcagcccggcggagcaggtc
ctgacctatccgcatcccgatatccggatcaccaatggcaccgaggtcacctatctgcac
cgcgatcacctgaactcggttgttgcgatgaccgatgccaccggcgcccgcgccgaggcc
cgggtctatgcccccttcggcgagatcgcctggcgagacggcggcacaagccccgacgaa
acctttggctatatcggggagcgctacgacagcgacgccggactgcaatatctcaacgcc
cgctactacgacccccgcctggccatgttcatacaacccgattggttcgaagtcacagaa
ccaggcgtcggcacaaacagatacgcatactccgcaaacgatcctatcaatcatatggat
cccgaggggaacgcgtattcgagaagtgaccgcgctcaggaggtgttggacaactatctg
gaacacagcgaggagttcggccacgcaagagaccagttcggctctgtgggctctggcgta
agcggaactatagctgccaaaaacagagccgctggcttgtctggaagattcacattcgat
gcccgaggaaactggaccagttcggtccgcggcgggctcgacgtcactgtgtcaacaaat
ggcggtcgaccacctggcgcgacgatttatccgaactcgccgcggggggcgagcgctggc
gcccaatactattaccccggaccgccatcctcacctcatggcctcggccatgcaagtggt
cggccattgctacaaaacacccgtcctggcgatgcgatcttgttgcagtcgacaccacga
cagttaatatcggttggcgggcgtttctacctgcagagctcaagaggcttaagaaccacg
ccttcaggaacatataactttgtcaccaccccagggggccgtatcttggtcgcgcgacaa
aataccagtccgaacatgtcaacccatctaggcttaagtggcgggagagatgtaaggtat
ggtggcacgatttcctttccgcataggcattcggccaataggggtgcaataaatcattgg
gataatgcctccgggcattacagaccgcctgcaaggcttgcacccaatgcagggttgcca
atgcagagcttcaggccattttga
DBGET
integrated database retrieval system
