Fontisubflavum oceani: QTA57_11855
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Entry
QTA57_11855 CDS
T09173
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhoc
Fontisubflavum oceani
Pathway
rhoc03030
DNA replication
rhoc03410
Base excision repair
rhoc03420
Nucleotide excision repair
rhoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QTA57_11855 (polA)
03410 Base excision repair
QTA57_11855 (polA)
03420 Nucleotide excision repair
QTA57_11855 (polA)
03440 Homologous recombination
QTA57_11855 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoc03032
]
QTA57_11855 (polA)
03400 DNA repair and recombination proteins [BR:
rhoc03400
]
QTA57_11855 (polA)
Enzymes [BR:
rhoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QTA57_11855 (polA)
DNA replication proteins [BR:
rhoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QTA57_11855 (polA)
DNA repair and recombination proteins [BR:
rhoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QTA57_11855 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QTA57_11855 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WJY20537
LinkDB
All DBs
Position
2318020..2320812
Genome browser
AA seq
930 aa
AA seq
DB search
MAFGKGHHLHLVDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMIHKMIESNTGPDAP
THAAVVFDKGSHTFRNDMYDQYKANRDAMPEDLRPQIPLTREATKAFNLACLELEGYEAD
DIIATLARQARDAGGRCTIISSDKDLMQLVGGGVEMLDAMKNARIDSEGVEAKFGVGPDK
VIDVQALAGDSVDNIPGAPGIGVKTAALLINEYGDLETLLQCAEEIKQPKRRETLINFAD
QIRLSKRLVTLDAETPIDVTLESLEVKDPEPEALMGFLAEMEFRTLTRRIAEQMGVEAPE
IKEVAAPVTEAAPEVKPFDISAYEIVREMPALEAWIAKAHAVGYVAVDTETTGLNEMTAE
LVGVCLSTAAGEGCYVPVGHKEGGDDLFGGAKLADGQLPLDDVLAALKPMLEDTSVLKIG
QNMKYDAKILARYGVDIAPIDDTMLMSYAMNAGHHGHGMDTLSDRYLGHEPIPIKSLLGS
GKSQITFADVSIEDAAPYAAEDADITLRLWQQFKPGLHRAEVTTVYETLERPLVPVLARM
EMAGIKVDRDTLSRMSNAFAQKMAGLEADIHALAGTPFNVGSPKQLGEILFDQMGLEGGK
KGKTGAYATGADVLEDLASQGHDLPARVLDWRQLSKLKSTYTDALQDHINADTGRVHTSY
SIAGANTGRLASTDPNLQNIPVRTEEGRRIREAFIAEPGKTLVSLDYSQIELRILAHIAG
IDALKQAFKEGQDIHAITASEMFNVPLDEMTPDVRRQAKAINFGVIYGISGFGLARNLRI
PRAEAQGFIDRYFERFPGIKDYMTETKEFAKTNGYVQTLFGRKIHTPEINAKGPKASFAY
RAAINAPIQGTAADVIRRAMIRMEAAIEGLPAKMLLQVHDELLFEVEDGAVDDLIGAARE
VMEGAADPAVKLSVPLTVDAGQGANWAEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcatttggcaaagggcatcatcttcacctggtcgatggctcggctttcatcttccga
gcctatcatgctttgccgccgttgacccggaaatcggacgggctgccgattggggcggtc
agcggcttttgcaacatgatccacaagatgatcgagtcgaataccggcccggatgcgccg
acccatgcggcagtggtgtttgacaagggctcacatacctttcgcaacgacatgtatgat
caatacaaggccaatcgcgacgcgatgcccgaggatctacgcccgcagatcccgctgacc
cgggaggcgacgaaagcgttcaacttggcctgtctggagctggaggggtatgaggccgat
gacataatcgccacgctcgcccgccaggcgcgggacgccggaggacgctgcaccatcatc
tcctccgataaggatctgatgcagcttgtcggcggcggggtcgagatgctggacgcgatg
aagaacgcgcggatcgacagcgagggggtggaggccaagtttggcgtcggcccggacaag
gtgatcgatgtgcaggcgctggcgggcgacagcgtggataacatccccggcgcgccgggg
atcggcgttaagaccgcggcgcttttgatcaatgaatacggggatttggagacacttctt
caatgtgccgaagagatcaaacagcccaagcgccgcgaaaccctgatcaattttgccgat
cagattcggctctcgaagcgtctggtcacgctggatgcggagacaccgattgatgtgacg
ttggagagcttggaggtgaaggacccggagccggaggccttgatggggttcctggctgag
atggaattccgcacgctgacgcgccggattgctgagcaaatgggcgtcgaggcgcccgag
atcaaagaggtcgccgcgccggtaacagaggccgcgcccgaggtgaaaccgttcgacatt
tcggcctatgagatcgtgcgggagatgcccgcgttggaggcctggatcgcgaaggcgcat
gcggtgggctatgtggcggtggataccgaaaccactggcctgaacgagatgaccgccgaa
ttggttggcgtctgcctctccacggcggcgggcgaggggtgctatgtgccggttggccac
aaagaaggcggcgatgacctcttcggcggcgcgaagctggccgatgggcaattgccgctg
gacgatgtgctggccgcgttgaagccgatgttggaggacacgtctgttctgaagatcggg
cagaacatgaaatacgacgcgaagatcttggcccgctatggcgtcgatatcgcacccatc
gacgacacgatgttgatgtcttacgcgatgaatgcgggccatcatgggcatgggatggac
accctgagtgatcgctatttgggccatgaaccgatcccgattaagtctttgctcggcagc
gggaaatcgcagatcacctttgccgatgtcagcattgaggacgcagcgccctatgccgcc
gaagacgccgatatcacgctgcgtctttggcagcagttcaagccgggtctgcaccgtgcc
gaggtgacaacggtctatgagaccttggagcgcccactggtgccggttctggcccggatg
gagatggccgggatcaaggtcgaccgcgacacgctttcccggatgtcgaacgcctttgcg
cagaaaatggcggggttggaggcggatattcatgccctggccgggacgccgttcaatgtg
ggctccccaaagcaactgggcgagattctcttcgatcagatgggcttggaggggggcaaa
aagggcaaaaccggcgcgtatgccaccggcgcggatgtcttggaagaccttgcctcgcaa
ggccatgatctgcccgcgcgtgtgcttgattggcggcaattgtcgaagctgaaatcgacc
tacaccgatgccttgcaggaccatatcaatgccgatacggggcgcgtgcatacgtcttat
tcgattgcgggtgcgaataccgggcgtttggcctccaccgatccgaatttgcagaacatt
ccggtgcgaaccgaggaaggtcggcgcatccgtgaggcgtttatcgcggagcccggcaag
acgctggtctcgcttgattattcgcagatcgagctgcgtatcttggcgcacattgccggg
atcgatgcgctgaaacaggcgttcaaagagggacaggacattcatgcgatcaccgcgtct
gagatgttcaatgtgccgctggatgagatgacgccggatgtgcgccgccaggcaaaggcg
atcaatttcggggtgatctacgggatttccggcttcggcctggcgcgcaatctgcgcatc
ccacgggccgaggcgcagggctttatcgaccggtattttgagcgcttcccgggcatcaag
gactatatgaccgagacaaaagagttcgcgaaaacaaatggatatgtgcagacgctgttc
ggccggaaaatccatacgcccgagatcaatgccaaaggccccaaggcaagtttcgcctat
cgcgcggccatcaatgcgccgatccagggcacggcggcggatgtgatccgccgggcgatg
atccggatggaggcggcgattgaggggctgcccgcgaagatgctgctgcaggtgcatgat
gaattgctgtttgaggtcgaggacggcgcggtggacgatctgatcggtgccgcgcgcgag
gtgatggagggcgccgccgatccggcggtgaagctctcggtgccgctgacggtcgatgcg
gggcagggggcgaattgggcggaggcgcattga
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