KEGG   Fontisubflavum oceani: QTA57_13785
Entry
QTA57_13785       CDS       T09173                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
rhoc  Fontisubflavum oceani
Pathway
rhoc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rhoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    QTA57_13785
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rhoc02022]
    QTA57_13785
Two-component system [BR:rhoc02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   QTA57_13785
SSDB
Motif
Pfam: Response_reg Sigma54_activ_2 Sigma54_activat HTH_8 AAA_16 AAA_22 AAA DUF815 AAA_7 HTH_30 TIP49 nSTAND3 AAA_5 Xre-like-HTH nSTAND1 Phage_NinH AAA_29
Other DBs
NCBI-ProteinID: WJY20872
LinkDB
Position
complement(2706271..2707641)
AA seq 456 aa
MDGTVLVADDDRTIRTVLTQALTRAGCKVHATSSLMTLMRWVDEGKGDLVISDVMMPDGN
GLDTLPQITEQRPGLPVIIISAQNTIMTAIQATEAEAYDYLPKPFDLPDLMKRAARALDQ
KRRAPAAKPAEAPTGGQDDLPLVGRTAVMQALYRLVARVMNTELPVLITGESGTGKSLIA
RAIHDFSDRRTLPFVVAAAADLEGMDGPSSILARARGGSILFDEVGDLNEEAQAKIVRML
DAMGDGAPRVMATSQKDLMEKMESGAFRQDLFYRLGGVTITVPSLRERVEDIPLLVTHFL
TRAEREGGPVRRLAPDAVDLVRAYSWPGNVRQLENCIRRLTITSQAEEITKAEVEAVLGN
QPAIEPLMGGGEGDKLSASVAKHLRRYFDLHGGVLPPPGLYTRILREVEAPLIEIALEAT
GGNQAKCADLLGINRNTLRKKITDLDIRVTRRRKLM
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggacggcaccgttcttgtcgccgatgatgatcgcaccatccgcaccgtgttgacgcag
gcgttgacgcgcgccgggtgcaaggtccatgcgacgtccagcttgatgacgctcatgcga
tgggtcgacgagggcaaaggcgatctggtgatctcggatgtgatgatgcccgatggcaat
gggttggacacgctgccgcagatcaccgagcagcggccgggcctgccggtgatcatcatc
tcggcgcagaacacaatcatgactgcgatccaggcgaccgaggccgaggcctatgattat
ctgccgaaacccttcgacttgccggatctgatgaaacgcgcggcgcgcgcgttggaccag
aagcgccgcgcacccgcggcaaagccagccgaagcgccgaccggcgggcaagacgacttg
cctttggtcgggcggacggcggtgatgcaggcgctttatcggctcgtcgcgcgcgtgatg
aacaccgaattgccggtcttgatcaccggcgaaagcggcacgggcaaaagcctgattgcc
cgcgcgatccatgatttctcagaccggcgaaccctaccatttgtcgtcgcggcggcggcg
gatctcgaaggcatggatggcccgtcatctatcttggccagggcgcgcggcgggtcgatc
ttgttcgatgaagtcggcgatcttaacgaagaggcacaggccaagatcgtgcgcatgctc
gacgcgatgggcgatggcgcgccgcgggtgatggccacgagccaaaaagacctgatggag
aagatggagagcggcgcgtttcgccaagatctgttctatcgcctcggcggcgtcacgatc
acggtgcccagtttgcgggagcgggtggaggatattccacttctggtcacgcatttcctg
acccgggcggaacgagagggcgggccggttcgtcgcctggccccggatgcggtggatttg
gtgcgtgcttattcctggcccggaaatgtgcggcagcttgaaaactgcattcgccgattg
acgatcacgagccaagccgaagagatcaccaaagccgaggtcgaggcggttttgggcaac
cagcccgccattgagccgctcatgggtggcggcgagggcgacaagctctcagcctcggtc
gccaaacatttgcggcgctatttcgatttgcatggtggggtcttgccgccgcccggtctc
tacacccggattttgcgcgaggtcgaggcgccgttgatcgagattgcgctggaggcgacc
ggcggaaatcaggcgaaatgtgccgatctgctcggcatcaatcgcaatacgctcagaaag
aagatcactgacctggatattcgcgtgacacgccgccgcaagttgatgtaa

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