KEGG   Fontisubflavum oceani: QTA57_16285
Entry
QTA57_16285       CDS       T09173                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rhoc  Fontisubflavum oceani
Pathway
rhoc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rhoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    QTA57_16285
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rhoc02022]
    QTA57_16285
Two-component system [BR:rhoc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   QTA57_16285
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 HTH_50 AAA_3 Mg_chelatase AAA_2 MCM AAA_16 AAA FleQ
Other DBs
NCBI-ProteinID: WJY21299
LinkDB
Position
complement(3208427..3209767)
AA seq 446 aa
MSAQDTYSILIVDDDKSMRVSLINLLEAAGWRAEAVSRAAQVEALWPELQPDVILSDVRM
PGMSGLELLASLDHNIAPPLVLISAHGDIPTAVQAMQDGAYSFVEKPYEPRRLLTILRHA
AEQHRMAKGTERLKVQLARLSGLDRLLIGQTAEIAGLREEILDLAEIDMPVLLQGETGTG
KELVARALHDLGPRAAAPFVPLNCAAIPADQFETEMFGIKGSHAGKLIAASGGTLFLDEI
SACPLPVQAKLLRVIEDQEITPIGSTTPVSVRFRVISASNLDTEQAVQDGHLRQDLLYRL
NTMVLTLPPLRHRRDDLVLLYTHFLQEFGQVYEITPPELGPEDVAALLAHDWPGNVRELR
NAAERRVLAARRGAGSVAAAIQSDPLVEDVPETLREAVAVFERELIGKAIRAHQGRMDAV
AEALGIGRRTLNEKIVKLGLDKDALL
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagcgcgcaagatacatacagcattctgatcgtggatgacgacaaatccatgcgcgtc
tcgctgatcaacttgctggaggccgcgggctggcgggccgaagcggtctcgcgcgcggcg
caggtcgaggcgctttggcccgagttgcagcccgacgtcatcctgtcggatgtgcggatg
ccgggcatgtctggcctggagcttctggccagccttgatcacaatatcgccccgcccttg
gtgctgatctccgcccatggggatatcccgacagcggtgcaggcgatgcaggacggggcc
tatagtttcgtagagaaaccttatgagccgcgccgtcttctgaccatcctgcgccatgcc
gccgaacaacaccgcatggccaagggcaccgagcggctgaaagtgcaattggcgcgcctc
tccgggctcgatcggcttctgattggtcagaccgcagagatcgccgggctacgcgaagag
atattggacttggctgagatcgatatgccggtgctgctgcaaggcgagaccgggaccggc
aaagaactggttgcccgcgctctgcatgatctggggccgcgtgccgccgcgcccttcgtg
ccgttaaactgtgccgcgatcccggcggatcaattcgagacggagatgtttggcatcaaa
ggcagccatgcgggtaagttgatcgcggccagcggcgggacgttgttcctggatgagatc
agcgcgtgccccctgccggttcaggcgaaattgctgcgggtgatcgaggatcaagagatc
accccgatcggcagcacgacgccggtttcagtgcgcttccgggtcatctcagcctctaat
ctcgacaccgagcaggcggtgcaggacggccatttgcgccaggatttgctctatcggttg
aacacaatggtgttgaccctgccgccgctccggcaccgccgtgatgatctggtgctgctt
tacacccatttcctgcaagagttcggccaggtttatgagatcaccccaccggagcttggc
cccgaggacgtggcggccttgctggcccatgactggcccggcaatgtgcgcgaattgcgc
aacgctgccgaacgccgggttctggcggcccggcgcggtgcggggtcagtcgcggcagcg
atccaaagcgatcctcttgtcgaagatgtgcccgaaaccctgcgcgaggccgtggcggtg
tttgagcgcgaattgatcggcaaagcgatccgcgcccatcaaggtcggatggacgccgtc
gccgaagcgcttggcatcggacggcggacgttgaacgagaaaatcgtcaagctcggcctc
gacaaagatgcgctgctctaa

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