Rhodococcus sp. 008: AOT96_02370
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Entry
AOT96_02370 CDS
T05462
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhod
Rhodococcus sp. 008
Pathway
rhod03420
Nucleotide excision repair
rhod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOT96_02370
03430 Mismatch repair
AOT96_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhod03400
]
AOT96_02370
Enzymes [BR:
rhod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOT96_02370
DNA repair and recombination proteins [BR:
rhod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOT96_02370
MMR (mismatch excision repair)
Other MMR factors
AOT96_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANQ69822
LinkDB
All DBs
Position
complement(521171..523663)
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AA seq
830 aa
AA seq
DB search
MNTYPALGEHDGHSQHDGGGARGHDAGSDALLEGLNPQQREAVVHAGSPLLIVAGAGSGK
TAVLTRRIAYLLAERGVTPGQILAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCV
RILRAQAALLPGLNSNFSIYDSDDSRRLLTMISKDLELDTKRFSARLLATHISNLKNELV
GPEEAVVAADQDPAELPRLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFPQIAEYY
RRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYAFRGATI
RNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELIVGY
VADNEHDEASFVASEIDRLVDQGETKFADIAVFYRTNNSSRALEEIFIRLGVPYKVVGGV
RFYERKEVRDIVAYLRVLANEDDTVSLRRILNTPRRGIGDRAEACVAVHSEHRNISFAAA
LRDGAEGKVALLNTRSQKAIASFLEMMDGLRALLPTAAADEDEPFELGDIGEVAEAVLER
TGYRAELAASSDPQDGARLDNLNELVSVAREFSSDARNAAGLIDPDDEETAAMREGEPDP
GSLAAFLERVSLVADADQLPDSDDGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALG
DPAELSEERRLAYVGITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEIPEDLINWRRED
PGTGGGFGSGRPGYGSGSRYGSQGGQGYGGGQNYGGGSGKAASTPSFGAARGRNNVLVLA
TGDRVSHDKYGLGTVLETKGTGPTATVTIDFGSAGKVRLMLIGGVPMVKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtacccagcactcggtgagcacgacggacattcccagcacgacgggggcggc
gcgcggggacacgacgcgggttcggacgccctcctcgagggtctcaacccgcaacagcgc
gaggccgtggtccatgccggttcgccgttgctgatagtcgcgggcgccggctcgggcaag
actgcagtgctgacgcgtcgtatcgcctatctgctggccgaacggggtgtcacccccggt
cagatcctggccatcacgttcaccaacaaggctgcggccgagatgcgcgagcgtgtggca
gctcttgtcggaccgcgtgccaacgccatgtgggtatcgacgttccactccagttgcgtg
cggatcctgcgagcacaggcggcgctcctgcccggtttgaactcgaatttctcgatctac
gattccgacgattcgcgtcgactgctgacgatgatctcgaaggacctcgagctcgacacc
aaacgattctccgcgcgccttctcgctactcacatctccaacctgaagaacgaactcgtc
ggaccggaagaggcggttgtcgcagccgatcaggatccggccgaacttccgcgactgatc
gccaaggtctacggccactaccaacagcggctgcgtgcggcgaacgcactcgacttcgac
gatctcatcggtgagaccgtcgcgcttcttcaggcgtttccacagatagccgagtactac
cgccgccgcttccgtcacgtgctcgtcgacgagtaccaggacaccaaccacgcgcagtac
atgcttgtgcgtgaactggtcggcggtgccggcgagtccgaccacgccgttgccccggcc
gaactgtgcgtcgtcggtgacgccgatcagtcgatctacgcattccgcggagccactatc
cgcaacatcgaagagttcgaacgcgactacccggatgctcggaccatccttctcgaacag
aactaccgttcgacgcagaacattctgtctgcggccaactccgtgatttccaagaacacc
ggccgacgagaaaagcgtctgtggaccgattcgggtgaaggcgaactgatcgtcggctac
gttgcagacaacgagcacgacgaagcatcgtttgtcgcctcggagatcgatcggctggtg
gaccagggcgagaccaagttcgccgacatcgcggtgttctaccggaccaacaactcctcg
cgcgcgctcgaggagatcttcattcgactcggagtgccgtacaaggtggtcggcggcgtt
cgcttctacgagcgcaaggaagttcgggacatcgtcgcgtatctgcgcgtcctcgccaac
gaggacgacaccgtgagcctgcgacgcattctcaacacgccccgacgcggtatcggtgat
cgagccgaagcctgcgtcgccgtgcactccgagcatcgcaacatcagcttcgccgccgct
ctccgtgacggcgcggaaggcaaagtggcgctgctcaatacgcggtcacagaaggccatc
gcgtcgttcctcgagatgatggacgggctgcgggccctgctaccgacagcggccgccgac
gaggacgaaccgttcgagctcggtgacatcggtgaggttgccgaggcggtgctcgagcgc
accggctaccgcgccgagcttgcggcgagcagcgatccgcaggatggcgcgcgactcgac
aacttgaacgaactcgtcagcgtggcaagggaattcagttccgacgcgcgaaacgcggcc
gggctgatcgatccggacgacgaggaaaccgcagcaatgcgtgaaggtgaacccgatccg
ggttcgcttgccgccttcctcgaacgggtatcgcttgtcgccgacgccgatcaactgccg
gactccgacgacggcgtcgtgaccatgatgacgcttcacaccgccaagggcctcgagttc
ccggtcgtcttcgtcaccggttgggaggacgggcagttcccgcacatgcgcgccctcggc
gatccggcggagctgtccgaagagcgtcgacttgcttacgtcggcatcacccgtgccagg
cagcgcctgtacctgacgcgcgcgatcatgcgttcggcgtgggggcaaccgatccagaac
ccggcgtcgcggttcatccaggagatcccggaggacctgatcaactggcgccgtgaggat
ccgggcaccggtggcggattcggaagcggcaggccgggttacggcagcggaagccgctac
ggcagccagggcggccagggatacggcggcgggcagaactacgggggagggtccggcaag
gccgcgtcgactcccagtttcggtgccgcgcgtggccgcaacaacgttctggtcctcgcc
acgggtgaccgcgtcagtcacgacaagtacggtctgggcaccgtgttggaaaccaagggc
actggccccaccgcgacggtcaccatcgacttcggtagcgcgggcaaggtgcggttgatg
ctcatcggcggtgtgccgatggtcaagctgtag
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