Rhodococcus sp. 008: AOT96_13270
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Entry
AOT96_13270 CDS
T05462
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhod
Rhodococcus sp. 008
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhod03032
]
AOT96_13270
03400 DNA repair and recombination proteins [BR:
rhod03400
]
AOT96_13270
Enzymes [BR:
rhod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AOT96_13270
DNA replication proteins [BR:
rhod03032
]
Prokaryotic type
DNA Topoisomerases
AOT96_13270
DNA repair and recombination proteins [BR:
rhod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOT96_13270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ANQ71730
LinkDB
All DBs
Position
2830695..2833631
Genome browser
AA seq
978 aa
AA seq
DB search
MAKADNGSGQGASGNPRRLVIVESPTKARKIAPYLGKDYVVEASVGHIRDLPRGAADVPA
KYKGESWARLGVNVDHDFEPLYVVSPEKKGKVAELKSLLKDADELFLATDPDREGEAIAW
HLLETLKPKIPVRRMVFHEITEPAIRAAAEDTRELDTDLVDAQETRRILDRLYGYEVSPV
LWKKVMPKLSAGRVQSVATRVIVQRERERMAFKSASYWDISATLDAGAEASPRSFGARLV
SVDGSRVASGRDFGADGKLKGSAVTVLDEAYARRLAEALQGVDLTVSSAEDKPYTRKPYP
PFMTSTLQQEAGRKLRFTSERAMRIAQRLYENGYITYMRTDSTTLSESAIAAARAQATEL
YGPEYVHPTPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHSKLDSDEFKLYELIWQRTV
ASQMADARGTTLTLRISGTAGTGEDCTFSASGRTIVFAGFLKAYVESVDEEAGGQSDDAE
SRLPVLVKGQEVTATKLDPDGHSTNPPARYTEASLIKTLEELGIGRPSTYSSIIKTILDR
GYVYKRGSALVPSWVAFAVIGLLEVHFGRLVDFDFTAGMEDDLDAIAGGREQRGNWLSSF
YFGGETGAEGSVAREGGLKKMVGVNLEEIDAREVNSIRLFDDAEGREVHVRVGRFGPYLE
RMVQNPDDPEGDLISQRANLPDDLPPDELTPEYAEKLFSTPQEGRKLGVDPLTGHEIVAK
EGRFGPYVTEILPEPPAEPEPDIVPVTAPEPEEISSGSTKTAVKKAAAKKAPAKKAAKKV
AGPKPRTGSLLKSMDLATITLEDALRLLSLPRVVGVDPESKEEITAQNGRYGPYLKKGTD
SRSLANEEQMFTVTLDEALKIYAEPKRRGRQASATPPLRELGVDPVSEKPMVIKDGRFGP
YVTDGETNASLRKDDDVESISDARASELLADRRARGPVKKKAAAKKAPAKKAAAKKTAAK
KAPAKKAAAKKAPAKKDS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaagcggacaacggcagcggtcagggagcgtccggtaaccctcgtcgcctcgtg
atcgtcgagtcaccgaccaaggcgcgcaaaatcgctccctacctcggtaaggactacgtc
gtcgaggcatcggtcggtcacattcgcgacctcccgcgcggcgcagcggacgttccggcc
aagtacaagggcgagtcgtgggcccgtctcggcgtcaacgtcgatcacgacttcgagccg
ctctatgtcgtgagcccggaaaagaagggcaaggtcgccgaactcaagtctctgttgaag
gacgccgacgagctcttcctcgcaactgaccccgaccgcgagggcgaggcaatcgcctgg
catctcctcgagactctcaagcccaagattccggttcgtcgaatggtcttccacgagatc
accgagccggcaatccgtgctgccgccgaagacacccgcgaactcgacaccgacctcgtc
gatgctcaggaaacccgccgcatcctcgaccgtctctacggttacgaggtcagcccggtt
ctctggaagaaggtcatgccgaagctctcggccggccgcgtccagtcggtggccactcgc
gtcatcgtccagcgtgaacgcgagcggatggcgttcaagtcggcgtcgtactgggatatt
tccgcgacgctcgacgccggtgcagaggccagcccgcgtagtttcggtgcgcgcctggtc
tccgtcgacggttcgcgtgtcgcctccggtcgcgatttcggagctgacggaaagctcaag
ggcagcgccgtcaccgtgctcgacgaggcgtacgcgcgtcgtctcgcggaagcgttgcag
ggcgtcgacctcacggtttcctccgccgaggacaagccgtacacgcgcaagccttacccg
ccgttcatgacgtcgacgctccagcaggaagccggacgcaaacttcgtttcacgtccgag
cgtgcaatgcgcatcgcacagcgtctgtacgaaaacggctacatcacctacatgcgtacc
gactcgacgactctctcggagtcggcgatcgctgccgctcgtgcgcaggccaccgagttg
tacggtccggaatacgtgcatccgacgccgcgtcagtacacccgcaaggtcaagaacgcg
caggaagcccacgaggcgatccgccccgccggcgacgtgttccagaccccgggtcagctg
cactccaagctcgattccgacgagttcaagctgtacgaactgatctggcagcggaccgtc
gcttcgcagatggccgacgcccgcggtacgacgttgacgcttcgcatctccggcacggca
ggcaccggcgaggactgcacgttctccgcttcgggtcgcaccatcgtgttcgccggcttc
ctcaaggcttacgtcgagagcgtcgacgaagaggccggcggtcagtccgacgacgccgaa
tccaggcttccggtgctggtcaagggtcaggaagtcacggccaccaagctcgatccggac
gggcacagcaccaacccgcccgctcgctacacagaagccagcctgatcaagacgctcgaa
gaactcggcatcggccgtccttcgacctactcgtcgatcatcaagaccatcctcgatcgc
ggatacgtctacaaacgtggcagcgcgctggttccgtcctgggtggcgtttgccgtcatc
gggctgctcgaggtgcacttcggccggctggtcgacttcgatttcacggcaggaatggaa
gacgatctcgacgcgatcgccggtggccgtgagcagcgtggcaactggctgagcagcttc
tacttcggcggcgagacaggcgctgaaggttcggtcgcccgcgagggcgggctgaagaag
atggtcggtgtcaatctcgaggagatcgacgctcgcgaggtcaactccatccgactgttc
gacgacgccgagggtcgcgaagttcacgtgcgcgtcggccggttcggcccgtatctcgag
cgcatggttcagaacccggacgatcccgaaggcgatttgatctcgcagcgggcaaatctt
cccgatgacctgccaccggacgagctcactcccgagtacgccgagaagttgttctcgacg
cctcaagagggccgcaagctgggcgtcgacccgctgacgggccacgagatcgtcgcgaag
gaaggccgcttcggtccctacgtgaccgagatcctgcccgaaccgccggccgagccggaa
ccggacatcgttcccgtcaccgctcccgagccggaagaaatcagctcgggcagcaccaag
actgcggtgaagaaggccgcggccaagaaggcgcctgcgaagaaggctgccaagaaggtc
gcaggccccaagccgcggaccggatcgctgctcaagtccatggacttggcgacgatcacc
ttggaagatgcgctgcgtctgctgtcgcttccgcgcgtcgtgggtgtcgaccccgaatcg
aaggaagagatcaccgcgcagaacggccgttacggtccgtacctgaagaagggcacggac
tcacgctcgctcgccaacgaagagcagatgttcaccgtcacgctcgacgaggccctcaag
atctacgccgagccgaagcgtcgtgggcgtcaggcgtcggcaacgcctccgctgcgtgag
ttgggcgtcgatccggtcagcgagaagccgatggtgatcaaggacggccgattcggtccg
tacgtcaccgacggcgagaccaacgccagccttcgcaaggacgacgacgtcgaatccatt
tccgatgctcgggcgtcggagttgctggctgatcgtcgtgcgcgcggcccggtcaagaag
aaggcagcagccaagaaggctccggccaagaaggccgctgccaagaaaacagccgcaaag
aaggccccggcaaagaaggccgccgccaagaaggctccggcgaagaaggactcgtaa
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