Rhodococcus sp. 008: AOT96_14655
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Entry
AOT96_14655 CDS
T05462
Name
(GenBank) AAA family ATPase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rhod
Rhodococcus sp. 008
Pathway
rhod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOT96_14655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhod03400
]
AOT96_14655
Enzymes [BR:
rhod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AOT96_14655
DNA repair and recombination proteins [BR:
rhod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOT96_14655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PDDEXK_1
AAA_25
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANQ71956
LinkDB
All DBs
Position
3134549..3137866
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFDLLGPLPTGTTVLEASAGTGKTYAIVGLATRCVAEGLADISQVLLVTFSRAATQELR
ERARERFAGVSAALVDPEAARRSDDDLVAYLATADDEEIGVRRRRLLRALAEFDAGTITT
THSFCQRMLDGLGIAGEREPDTTFVESVDDLISEVVSDLYLSRYSRTDSSPPFSTKDALA
IARSAVGDGQAILEPDGEEETAPGQRVLFAAAARLEVERRKRTKGIRDFNDLLTLLHGVL
TDPEYGPVACRRVREKFKVVLIDEFQDTDPLQWDILRLAFHGHTTLVLVGDPKQAIYAFR
GAEVLSYLDAVDQADAHQELTTNWRSDPGLLAALEHLYGGAALGNEGIVAHPVEASHKKS
RLFGPVPMRVRHLPRTGAGPLNRSGFPAVGRLRSRVADDVAADVVALLGGDARLAVDGDP
RPVEPGDVAVLVRTHKHVAMIRDALDAVGVPSVLTGGSSVFATPSATQWLWLLQAIEQPH
RSDRVRLTALSPIFGRTSEELDKDGDNVVAELAGQLRSYSGLFARVGFAAVFERISAETK
LEKRVLAAPSGERDFTDLRHVAQLLGRVATEEAFGLSALVRWLSDRIKDPTSGSATDRSR
RLDSDAAAVQIATVHATKGLEFPIVYVPFSWESVGGFNSPTQLLHDPEGRRILDVGGQEG
PGYNARKTVAEAEEAGEELRLLYVALTRAQCQLVLCWAPSYGTSRSPLHRLMLGRTPGIA
EPARVVKVLDDGTTAARLATWPAAASDVISVEPVGPHPPSPVQWSRAAADVTELAAARFD
RDLDTLWRRTSYSALTAGAHHAVTTTGSEVEDPEKDDEPEDSVDLGSITPSPLEAFPSPM
NGLPAGAAFGTLVHEVLEVVDTAVADLREELGMRCAEAVSVRAAEVDSEALADALYLVMQ
TPLGFGTLATIAPKDRLPELDFELPLAGGDDPVSMSVTLRGVSELLRRHLSSDDILASYA
DYLDRVETSPMRGFLTGSIDAVLRIPGPSFVIVDYKTNRIGRGDLTAANYTRELMATEMM
RSHYPLQALLYSVALHRYLRWRLPDYDPHRHLGGAQYQFVRGMLGPDSPPECGVFEWKPP
AQLTVELSDLLAGLDASHTVGEKIR
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
gtggacttcgatctattggggccactgcctaccggcactacggtgttggaagcgagcgcc
ggaaccggcaagacctacgcgatcgtcggactggcgacccgttgtgtagccgaaggtctc
gccgacatatcgcaagttctgctggtgacattcagcagggccgccactcaggaacttcgt
gagcgtgccagggagaggttcgcgggagtgtccgccgctctggtcgacccggaggcggcg
aggcggtcggatgatgatctggtggcgtacctcgccacagctgacgacgaggagatcggc
gtgcggcgtcgtcgactcctgcgcgctctcgcggagttcgacgccggcaccatcacgacc
acccacagtttctgtcagaggatgctcgacgggctgggcatcgccggggaacgtgaaccg
gacacaacttttgtggagtcggtcgacgacctgatcagtgaggtcgtctcggatttgtac
ctcagccgctacagccggacggactcgtctccaccgttctccacgaaggacgcgctggcc
atcgcccgaagcgcagtcggcgatggtcaggcaattctcgaacccgacggcgaggaggag
accgcacccggtcagcgcgtcctcttcgcggctgctgctcgcctcgaggtcgaacgacgt
aagcggaccaaaggaattcgcgacttcaacgatctgctcacgctgttacacggtgtattg
acggatccggaatacggtcccgtcgcgtgtcgtcgggtgcgcgaaaagttcaaggttgtg
ttgatcgacgagttccaggacaccgatccgttgcagtgggacattctgcggttggccttc
cacggacacaccaccctggtcctggtcggtgatcccaaacaagccatctatgcgttccgc
ggggcagaagtcctgagttatctcgatgcggtcgatcaggcggatgcgcaccaggagttg
accaccaattggcgtagcgacccagggttgttggcggcactcgaacacctctacggtggt
gccgcactcggcaacgaaggcatcgtcgcgcatccggtggaggcttcgcacaagaagtct
cggttgttcggcccggtgccgatgcgtgtacgccatctgccccgtaccggagccggaccg
ctcaatcgttcgggatttccggccgtaggcagacttcgcagtcgcgtcgcggacgacgtc
gcagcagacgtggtcgcgctcctgggcggcgatgcccgcttggcagtcgacggtgatcca
cgcccggtcgaaccaggagacgtcgcggtgttggtgcgcacccacaagcacgtggcgatg
atccgcgatgctctcgatgccgtcggtgtaccttccgtattgaccggagggtccagtgtt
ttcgcgacacccagtgcgacccagtggctgtggctgttgcaggcgatcgagcagccccat
cgctccgatcgtgtccggttgacggccctctcgccgattttcgggcgcacctccgaagaa
ctggacaaggacggcgacaacgtcgttgcagaacttgcaggtcaactgcgctcctattcc
gggctgttcgcacgcgtcgggtttgcggctgtgttcgaaagaatctctgccgaaacaaaa
ctggagaagcgtgtactcgcggcaccgtccggcgaacgagatttcaccgatctgcggcac
gtcgcacaactcctcggtcgcgtcgccaccgaggaagcgttcgggttgagcgcactggtt
cgctggctttccgatcggatcaaggacccgacgtccgggagcgccaccgatcgaagccgc
cgcctcgacagtgacgctgccgcagtgcaaatcgctacggtgcatgccaccaaagggctc
gagttcccgatcgtctacgtcccgttcagttgggagagcgttggcggcttcaactcgccg
acgcagctgttgcacgacccggagggacgccgcatcctcgacgtcggcgggcaggaaggc
ccggggtacaacgccagaaagactgttgcggaggccgaagaagcgggcgaagaactgcgg
ctgctgtacgtggcgctgacccgggcgcagtgccaactcgtgctctgttgggcacccagc
tacgggacctcccgctcgccgctgcaccggttgatgctcggacgtacacccggcatcgcc
gaacctgctcgggtagtgaaggtgctcgacgacggtacaaccgcagcacggctcgcaact
tggccggcagcagcttccgacgtgatctcggtggaacctgttggtccccatccgccctcg
cccgtccaatggtccagagcggctgcggacgtgaccgaactggccgcggcgcgtttcgat
cgagacctggacactctgtggcgtcgtacgtcgtactcggcactcaccgccggagcgcac
cacgcggtcacgaccacgggcagcgaggtcgaggatcccgaaaaagacgacgagccagag
gattccgtagacctcgggagcattaccccctcgcccctggaggcgttcccttcacccatg
aacggacttcccgcgggcgccgcattcggcacgctggtgcatgaggtgctcgaggtggtg
gacacggctgtggcagatctgagagaggaactcgggatgcgttgcgccgaggcggtctcg
gttcgggcggccgaggtcgactccgaagcactcgcggatgcgctgtatctggtgatgcag
actcccttgggattcggaaccttggccacgatcgcgccgaaagatcgtcttcccgaactc
gatttcgaactcccactggccggtggcgacgatccggtgtcgatgagtgtcacactccgc
ggagtgtcggaactgttgaggcgccatctttcctccgacgacattctggcgtcgtacgcc
gactatctggaccgtgtcgagacgtcaccgatgcgcggattcctgacgggcagtatcgac
gcggtcttgcggatcccgggcccgtcgttcgtgatcgtcgattacaagaccaaccggatc
ggtcgcggcgatctgacggctgccaactacacgcgtgaactcatggcgacggagatgatg
cgctcgcactatccgctgcaggcactgctgtattcggttgcactgcatcggtatctgcgg
tggcgcctgcccgactacgatccgcaccgtcatctcgggggcgcgcagtatcaattcgtg
cgtgggatgctcggcccggacagcccgccggaatgcggtgtcttcgaatggaaaccgcct
gctcagctgacggttgaactatcggatctgctggccggtcttgatgcgtcccacacagta
ggggagaagattcgatga
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