Rhodococcus sp. 008: AOT96_18370
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Entry
AOT96_18370 CDS
T05462
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
rhod
Rhodococcus sp. 008
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhod03021
]
AOT96_18370
Transcription machinery [BR:
rhod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOT96_18370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
MarR
MarR_2
Sigma70_ECF
HTH_ParB
HTH_24
HTH_31
DUF7343
GntR
HTH_23
KORA
LacI
DUF1492
UBA_2
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ANQ72605
LinkDB
All DBs
Position
complement(3938867..3939661)
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AA seq
264 aa
AA seq
DB search
MTASADGPSRPRRRSTDEYRDVIPVFEELRTLEPHSPEYERVRTALITRCLPLAEHIARR
FDGRGEAHDDLVQVARLGLVNAVDRFDSTRGSDFVSFAVPTVMGEVRRHFRDTGWALRVP
RRMKELHFQLGQAISELSQQLGHAPTVDELAETLGIEREEVAQALIAGNAYQTVSVDGAA
SNHTDDLPLVETLGDYDAALENVENHEALRPLLDKLPERERTVLMLRFFGNLTQTQIAEK
VGVSQMHVSRLLAKTLSNLREQLD
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcttccgcagacggcccgtcacgcccgcgtcggcggtccaccgacgaatatcgg
gacgtaataccagttttcgaggaactgcggaccctcgagccccacagcccggagtacgaa
cgagtgcgcactgcactcatcaccagatgcctaccgttggccgagcacatcgccagacga
ttcgacggtcgtggcgaggcacacgacgatctggttcaggtggcgcgtctcggtctggtc
aacgccgtcgaccgtttcgattccacgcgcggatccgatttcgtctccttcgcagttccc
accgtgatgggcgaggttcgacgacacttccgcgacaccggttgggcattgcgggttccc
cgccggatgaaggagttgcacttccaactcgggcaggccatcagcgagctgtcacaacag
ctcgggcacgcgccgaccgtcgacgagttggccgagacgttggggatcgaacgcgaagaa
gttgcccaggccttgatcgccggcaacgcgtatcagacggtctcggtcgacggtgccgcg
tccaatcacaccgacgatctcccgctcgtggaaacactcggtgactacgacgcagcactc
gagaacgtcgagaatcacgaggcgttgcgtccgcttctcgacaagcttcccgagcgagag
cggacggtgttgatgctcagattcttcggaaacctgacgcagacacagatcgccgagaaa
gtcggtgtgtcccagatgcacgtgtcgaggttgctcgcgaagacattgagtaatcttcgc
gagcaactcgactga
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