Rhodococcus sp. 008: AOT96_21455
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Entry
AOT96_21455 CDS
T05462
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhod
Rhodococcus sp. 008
Pathway
rhod03420
Nucleotide excision repair
rhod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOT96_21455
03430 Mismatch repair
AOT96_21455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhod03400
]
AOT96_21455
Enzymes [BR:
rhod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOT96_21455
DNA repair and recombination proteins [BR:
rhod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOT96_21455
MMR (mismatch excision repair)
Other MMR factors
AOT96_21455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
TPM_phosphatase
Motif
Other DBs
NCBI-ProteinID:
ANQ73129
LinkDB
All DBs
Position
4617830..4621222
Genome browser
AA seq
1130 aa
AA seq
DB search
MAAATQKARRPKIDPVDLAVALGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARV
VWLVANGFVDPEAVLGLTFTRKAAQQLTSRIRKRLARLAGSDVLRALDPTGGVRSRILAG
EPEVSTYHAYAGRLLSEHGLLLPIEPSATLLSETELWQVAHRVVSGWDSDLDTDKNPGSI
TETVLALAGQLAEHLVDPEQLLEAHTELDKLIHTLPAGPKQRGGPSKELLNYLDVQHKRI
ELLPLVARLGETLRREGALDFGSQMSLSARVASEHPEVGQTERERFRVVLLDEYQDTGHA
QRVLLSSLFGGGADGRLALTAVGDPMQSIYGWRGASAANLPRFATDFPLANGKPAPTLEL
LTSWRNPPEALELANLSSAPLRRRGVAVSTLRARPGAVAGDVRLALLGDVEQERQWVAEK
IAEEYEAARAEDRPTPTAAVLIRRNADAAPLAEALRSKGLPVEVVGLGGLLHTPEVADVI
AMLRVVADPLAGSAAVRLLTGARWQIGAKDLAALSQRSRELAISAGYGTAGAVTDAEALT
SAVQDALPGENAEQAGLVDSISDPGPAERYSALGYTRINAIAAELASLRERIGQPLTELV
AEVERVLGIGIEAGARTRVGVVGTAGREHLDAFADVVANYATRPTANLPGMLAFFAAAEQ
IEKGLTPGEVEVAPDRVQILTVHSAKGLEWEVVAIPHVSDGVFPSTTASGSWLGALAELP
PSLRGDRAVDADSADGVPVLDLEELYNRKDLENAITAHKKALSNRRLDEDRRLFYVALTR
TERALFISAHHWAESGSEPKGPSEFLDELHQMVAAENDADEEDSRGAIGVVEEWAPAPEP
DTENPLAATPRTAQWPPDPLGARRGAVEAGAASVLSALASLPQDSQEAEEPEDDPENWAS
DVDVLLAEREARANARAEVILPAQLSVTQLVDLKADPDELAARLRRPLPYPPNPLARRGT
AFHAWIERRFGATRLLDLDELPGAADTGAGPETDLVKLQDAFLRSPWANRSPIEVEVPFE
TSIAGTVLRGRIDAVFADPDGGWTVIDWKTGAEPSAANEDAVVMQLAAYRVAWAELMSAR
ARSAGRNEQFPADKVRAAFHYVRSGRTIAPENLPDGEALARLIRTAGAQD
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccgcgacgcagaaggcacgccgaccgaagatcgatcctgtcgacctggcggtc
gcgctcggtcaacacccgccgacgccggaacaggcggcagtcatcgccgcaccgctcggt
ccgacattggtcgtcgccggtgccggtgccggtaagaccgagacgatggctgctcgcgtc
gtgtggctggtggccaacggcttcgtcgatcccgaggccgttctcggattgaccttcacg
cgcaaagcggcacaacagctcacgtcgcgaatccgcaagcgcttggcgcgactggcgggt
tcggacgttttgcgggcactcgacccgaccggcggagtgcgttcccggattctggccggg
gaacccgaagtcagtacctaccatgcttacgcgggacggttgctgtccgagcacggactg
ctgttgccgatcgaaccctcggcgacgctgttgtccgagaccgaactgtggcaggttgcg
caccgcgtcgtgagcggctgggacagtgatctggacaccgacaagaatccggggtccatc
accgaaaccgttctggcccttgccggtcagttggcggagcacctggtcgaccccgagcag
ttgctcgaggctcacaccgagttggacaagctgattcacactctgcccgccggtccgaaa
cagcggggtgggccgagcaaagagctgttgaattaccttgatgtgcaacacaaacgcatc
gagctactgcccctcgttgcccggctgggtgagacgctgcggcgtgaaggcgcattggat
ttcggcagccagatgtcgctgtcggcccgtgtcgcctccgaacatcccgaggtcgggcaa
accgagcgtgagcgctttcgggtagttcttctcgacgagtaccaggacaccggtcacgct
cagcgagtgttgttgtcctcgttgttcggcgggggagccgacggccggttggcgctgaca
gccgtcggcgatccgatgcagtcgatctacggttggcgaggcgcgtcggcggccaacctg
ccacggtttgcaaccgacttcccgcttgccaacggaaagccggctccgacgctcgaactg
ctcaccagttggcgtaacccgccggaggctctcgaactggcaaacctgtcgtcggcaccg
ttgcgccgacgcggtgtggccgtcagcacacttcgtgcgcggccgggagccgtcgccgga
gacgttcgactggcgctgctgggagacgtcgaacaggaacgtcagtgggttgcggagaag
atcgccgaagaatacgaggcggcacgtgccgaagaccgcccgacgcccacggcagcggtg
ttgatccgccgcaacgccgatgctgccccgctggccgaggctttgcggtccaaaggtctg
ccggtcgaagtggtcggactcggtgggctcctgcacacacccgaggtggcggacgtgatc
gccatgctccgagtggtcgccgatccgctggcgggcagcgccgccgttcggctgctcacc
ggagcgagatggcagatcggcgcgaaggacctcgccgcactctcgcaacgctcccgcgaa
cttgccatctccgccggatacggaacagcgggtgcggtcaccgacgccgaggcgctcacc
tcggcagttcaggacgcgctgccgggggagaacgccgagcaagcaggattggtcgattcg
atctccgatccaggcccggcagaacgttattcagctctcgggtacacacgcatcaacgcg
atagcggcagaattggcgtcgttgcgcgaacgtatcggccagccgctcaccgaactggtg
gcggaggtcgagcgggtgctcggtatcggaatcgaggcaggcgcgcgaactcgagtcggt
gtcgtcgggaccgcgggccgcgagcatctcgacgcatttgccgacgtcgtcgccaattac
gcgacgcgtccaacagccaatctgcccgggatgctcgcattcttcgcggccgccgaacag
atcgaaaagggcctcactccgggcgaagtggaggtggcgccggatcgcgtgcagatcttg
accgtgcactcggcgaaggggctcgaatgggaagtagtggcgatcccgcatgtcagcgac
ggggtgttcccctcgaccaccgcgtccggatcgtggctcggggcgctcgccgaactgcca
ccgtcgttgcgtggggaccgggccgtcgacgcggattcggccgacggagttccggtgctc
gacctcgaggagctctacaaccgcaaggacctcgagaacgcgatcacggcgcacaagaag
gccttgtccaaccgtcgactggacgaggaccggcgactgttctacgtcgcgctgaccaga
accgaacgggcgctgttcatctcggcgcatcactgggcggaatccggttcggaaccgaag
gggccttcggagttcctggacgagctgcatcagatggtcgcggccgaaaacgatgccgat
gaggaagactcgcgcggtgcgatcggcgtcgtggaggagtgggcgcctgcaccggaacct
gacaccgagaacccgttggccgccacgccccgtacggcgcagtggccgccggatccgctg
ggtgcgcggcgcggcgcggtcgaggccggagccgcaagcgtcctgtccgcacttgcttcg
ctgccgcaagacagccaagaggcggaagaaccggaggacgatccggagaactgggcctcg
gacgtcgacgtgctcttggccgagcgcgaagcccgggcaaacgcgcgtgccgaagtgatt
ctcccggcgcagctttcggtgactcagctcgtcgacctcaaggcagatccggatgaactc
gcggcacggctgcgtagaccactgccgtacccaccgaacccgctcgctcggcgcggcacg
gcttttcacgcctggatcgagcgaaggttcggtgcgacccgactgttggatctcgacgaa
ctacccggcgccgcggataccggcgcgggtcccgagaccgatctggtgaaacttcaggat
gcgttcctgcggtccccgtgggccaatcgcagcccgatcgaagtggaagttcctttcgaa
acatccattgccggaacggttctccgcggtcggatcgacgctgtgttcgccgatcccgac
ggcggatggacggtgatcgactggaagaccggtgccgaaccgtcggccgccaacgaggac
gctgttgtgatgcagttggccgcgtatcgggtggcctgggccgaattgatgtcggccaga
gcccgttcggcggggcgcaacgaacagtttccggccgacaaggtgcgggcggcgtttcac
tacgttcgatcgggtcgcaccatcgcacccgagaacctgccggacggtgaggctctcgct
cgcctcatccgaacggcaggcgcgcaagattag
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